Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11094 | Canola | cytosol | 65.56 | 23.98 |
| CDX73008 | Canola | cytosol | 76.67 | 13.48 |
| CDY60136 | Canola | cytosol | 76.67 | 13.48 |
| HORVU0Hr1G006640.1 | Barley | cytosol | 64.44 | 12.75 |
| GSMUA_Achr9P08610_001 | Banana | cytosol | 68.89 | 12.09 |
| VIT_17s0000g08930.t01 | Wine grape | cytosol | 67.78 | 11.87 |
| PGSC0003DMT400013292 | Potato | cytosol | 65.56 | 11.48 |
| Solyc06g064830.2.1 | Tomato | nucleus | 65.56 | 11.48 |
| KXG32415 | Sorghum | cytosol | 65.56 | 11.41 |
| Os01t0322800-01 | Rice | nucleus | 65.56 | 11.41 |
| TraesCS3B01G226600.1 | Wheat | cytosol | 64.44 | 11.24 |
| TraesCS3A01G197200.1 | Wheat | nucleus | 64.44 | 11.22 |
| TraesCS3D01G200300.1 | Wheat | cytosol | 64.44 | 11.22 |
| Zm00001d040689_P001 | Maize | cytosol | 65.56 | 10.57 |
| GSMUA_Achr6P25450_001 | Banana | nucleus | 1.11 | 0.23 |
Protein Annotations
| EnsemblPlants:CDY41611 | EnsemblPlantsGene:GSBRNA2T00073261001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR006594 |
| InterPro:LisH | PANTHER:PTHR22848 | PANTHER:PTHR22848:SF0 | PFscan:PS50896 | ProteinID:CDY41611 | ProteinID:CDY41611.1 |
| SignalP:SignalP-noTM | UniParc:UPI0004EE844F | UniProt:A0A078HV74 | MapMan:35.1 | : | : |
Description
BnaC05g43480DBnaC05g43480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV74]
Coordinates
chrLK032501:-:215676..216211
Molecular Weight (calculated)
10136.3 Da
IEP (calculated)
4.350
GRAVY (calculated)
0.052
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MTSLLMTALC VIKIVLQFCK ENSLNQTFQT LQSECQVSLN TVDSVETFVS DINNGRWDSV LPQVSQLKLP RNKLEDLYEQ PINSISGCLL
001: MALEIEARDV IKIMLQFCKE NSLNQTFQTL QSECQVSLNT VDSVETFISD INSGRWDSVL PQVSQLKLPR NKLEDLYEQI VLEMIELREL DTARAILRQT
101: QVMGVMKQEQ AERYLRMEHL LVRSYFDPHE AYGDSTKERK RAQIAQAVAA EVTVVPPSRL MALIGQALKW QQHQGLLPPG TQFDLFRGTA AMKQDVEDTH
201: PNVLTHTIKF GKKSHAECAR FSPDGQFLAS SSVDGFIEVW DYISGKLKKD LQYQADESFM MHDDPVLCID FSRDSEMLAS GSQDGKIKIW RIRTGVCIRR
301: FDAHSQGVTS LSFSRDGSQL LSTSFDQTAR IHGLKSGKLL KEFRGHTSYV NHAIFTSDGS RIITASSDCT VKVWDSKTTD CLQTFKPPPP LRGTDASVNS
401: IHLFPKNTEH IVVCNKTSSI YIMTLQGQVV KSFSSGNREG GDFVAACVST KGDWIYCIGE DKKLYCFNYQ SGGLEHFMMV HEKDVIGITH HPHRNLLATY
501: SEDCTMKLWK P
101: QVMGVMKQEQ AERYLRMEHL LVRSYFDPHE AYGDSTKERK RAQIAQAVAA EVTVVPPSRL MALIGQALKW QQHQGLLPPG TQFDLFRGTA AMKQDVEDTH
201: PNVLTHTIKF GKKSHAECAR FSPDGQFLAS SSVDGFIEVW DYISGKLKKD LQYQADESFM MHDDPVLCID FSRDSEMLAS GSQDGKIKIW RIRTGVCIRR
301: FDAHSQGVTS LSFSRDGSQL LSTSFDQTAR IHGLKSGKLL KEFRGHTSYV NHAIFTSDGS RIITASSDCT VKVWDSKTTD CLQTFKPPPP LRGTDASVNS
401: IHLFPKNTEH IVVCNKTSSI YIMTLQGQVV KSFSSGNREG GDFVAACVST KGDWIYCIGE DKKLYCFNYQ SGGLEHFMMV HEKDVIGITH HPHRNLLATY
501: SEDCTMKLWK P
Arabidopsis Description
SMU1SMU1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHG8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.