Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- extracellular 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81012 | Canola | mitochondrion | 98.36 | 98.36 |
| CDY09928 | Canola | cytosol, golgi, nucleus | 98.36 | 32.43 |
| CDY55768 | Canola | cytoskeleton, cytosol, nucleus | 90.16 | 31.25 |
| Zm00001d029737_P001 | Maize | nucleus, plasma membrane, plastid | 40.98 | 23.58 |
| CDY14075 | Canola | nucleus | 73.77 | 22.06 |
| CDY02435 | Canola | nucleus | 70.49 | 21.5 |
| CDY08246 | Canola | nucleus | 70.49 | 21.5 |
| CDY10555 | Canola | nucleus | 70.49 | 21.5 |
| CDY26099 | Canola | nucleus | 70.49 | 21.5 |
| CDY04996 | Canola | nucleus | 70.49 | 21.08 |
| GSMUA_Achr6P29890_001 | Banana | nucleus | 55.74 | 16.43 |
| CDY23601 | Canola | mitochondrion, nucleus, plastid | 72.13 | 13.84 |
| CDY56078 | Canola | nucleus | 27.87 | 13.18 |
| Zm00001d019598_P002 | Maize | nucleus | 62.3 | 12.58 |
| CDX81013 | Canola | nucleus | 0.0 | 0.0 |
| CDY55771 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.310.10 | MapMan:35.2 | GO:A0A078IZ43 | UniProt:A0A078IZ43 | EnsemblPlants:CDY55770 | ProteinID:CDY55770 |
| ProteinID:CDY55770.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006352 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00017330001 |
| InterPro:IPR012295 | PFAM:PF00352 | PANTHER:PTHR10126 | PANTHER:PTHR10126:SF36 | SUPFAM:SSF55945 | InterPro:TBP |
| InterPro:TBP_dom_sf | UniParc:UPI0004EE3A5C | : | : | : | : |
Description
BnaA03g55450DBnaA03g55450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZ43]
Coordinates
chrLK033427:-:45576..45761
Molecular Weight (calculated)
7056.0 Da
IEP (calculated)
11.059
GRAVY (calculated)
0.030
Length
61 amino acids
Sequence
(BLAST)
(BLAST)
1: MFPGLIYRIR GMKGMKGAQI VLLIFVSGKI VITGAKKREE TYKAFENIYP VLTQFQKKFT R
001: MTDQGLEGSN PVDLSKHPSG IVPTLQNIVS TVNLDCKLDL KAIALQARNA EYNPKRFAAV IMRIREPKTT ALIFASGKMV CTGAKSEDFS KMAARKYARI
101: VQKLGFPAKF KDFKIQNIVG SCDVKFPIRL EGLAYSHAAF SSYEPELFPG LIYRMKVPKI VLLIFVSGKI VITGAKMRDE TYKAFENIYP VLSEFRKIQQ
101: VQKLGFPAKF KDFKIQNIVG SCDVKFPIRL EGLAYSHAAF SSYEPELFPG LIYRMKVPKI VLLIFVSGKI VITGAKMRDE TYKAFENIYP VLSEFRKIQQ
Arabidopsis Description
TBP1TATA-box-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P28147]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.