CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044447_P007	Maize	mitochondrion	55.39	84.44
Os01t0610600-01	Rice	mitochondrion	63.3	61.13
TraesCS3A01G218500.4	Wheat	mitochondrion	59.63	57.02
TraesCS3D01G233900.2	Wheat	mitochondrion	59.75	56.88
TraesCS3B01G248600.1	Wheat	mitochondrion	59.63	56.77
GSMUA_Achr1P14560_001	Banana	nucleus	34.06	38.52
KRH16019	Soybean	plastid	34.75	35.56
VIT_04s0008g04720.t01	Wine grape	mitochondrion	31.65	35.11
EER89572	Sorghum	plastid	18.81	35.04
Bra008968.1-P	Field mustard	mitochondrion, plastid	29.82	34.35
CDX97099	Canola	plastid	29.47	34.18
AT5G11350.4	Thale cress	nucleus	29.59	34.17
CDX69764	Canola	mitochondrion, plastid	29.47	33.99
Solyc08g067420.2.1	Tomato	plastid	32.91	32.88
KRH05096	Soybean	cytosol	15.83	27.06
EES19469	Sorghum	plastid	9.98	22.14
OQU91798	Sorghum	cytosol	13.3	19.14
KXG40109	Sorghum	mitochondrion	13.19	18.55
CDX97100	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:EES03263	EnsemblPlantsGene:SORBI_3003G217200	EntrezGene:8054368	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	ProteinID:EES03263	ProteinID:EES03263.1
RefSeq:XP_002458143.1	SEG:seg	SUPFAM:SSF56219	SUPFAM:SSF81995	unigene:Sbi.20944	UniParc:UPI0001A84F9D
UniProt:C5XQY7	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:55272705..55279232

Molecular Weight (calculated)

96293.3 Da

IEP (calculated)

4.930

GRAVY (calculated)

-0.701

Length

872 amino acids

Sequence
(BLAST)

001: MRLASSAFLR RAAAMSSPSS YSRRGYPRPR RGYSGRPSTP PPDAAAEIVS GDSHRSAVRA ANESLRRGGG VRGPPPPYRQ EPHPHQPQYG YGYGYGYGQT
101: QQPSPPYGFV PYNYGHPQPL PPGPQYGYGA PNPYVHGQLR PQPYGRGAPS AGFRPGAPQL PPRLADYRRR WRFAKQRPPH QAERFKVLSY NILADYLAQE
201: HQFLYERIPS FILDWNWRKD KLLFEFGLWS PDILCLQEVD KFTDLEQEMA SRGYNGTWKI RTGDAADGCA IFWRTTRFQL RYEEDIEFNK LGLRDNVAQL
301: CVLESVVPQN VQTDSTSLST SSNDPQQAKQ VVICNIHVLY NPKRGDIKLG QVRTLLDKAY TLSKMWNNAP VILCGDFNST PKSPLYKFML EQKLNLSGLA
401: KNTISGQQTG GSSQGLYTGP NISRSHPPFS PTNNREGNIT LLNDCKPQTE TTKLVENSSP AGREPFLTDT SSESLVDSKS FSRTTVDSKS SYSCGNNVPC
501: SGSSKLDDQG LLNSLEDTVK SACAFDADEE CKPTDKGSPG GITTESGEGP DIADAPSAPA TVYTEILRSG SCEIIDSSQL LSSDNLAGDV ISEELTDQLF
601: TVSQDKPHEK ENNTESMLSA EENCATKEPE SSHFNGSQNV TDAIHQMSNV KLEGESSAGV EEPVHQPNGA VSDACVDQCS AEVIKSHSVS CRDEPENNAH
701: ALEDDTANGE VTCTDVNSDP TFFEELSGGN GHLLEEEDQL PETSDSSPSS QQVTLNEGYY YYDPYRWTPE EIKAATGKDE CTFMEHSLKL RSVYTDVEDF
801: DGTKDASKEP LVTSYNRKFM GTVDYIWASE GLHTVQVLDT FPKEILKQTI GFPTKKWGSD HIALACELAF TK

Best Arabidopsis Sequence Match ( AT5G11350.3 )
(BLAST)

001: MRRSRFVAQV FSDVTFADAS TISAPIFTMS TRAPYRGARG RGRGRGGRSF SDRPYNDDAG RDQFVTGDSH FQSVHDANFR FRHGEPYRQH QPPLDQRQQP
101: PFNQNYEFRP PPPSRGQWQQ FRQPNQFPSN QNYAACPPPP FYQNQMSRPP PQQSFRQRPR SKPSDYREWE YAKTPPSPGS EKFVVLSYNI LADYLANDHW
201: RSLYFHIPRN MLSWGWRKSK LVFELSLWSA DIMCLQEVDK FQDLEEEMKH RGYSAIWKMR TGNAVDGCAI FWRSNRFKLV HEESIQFNQL GLRDNVAQIC
301: VLETLLTSHT KENETPPPES SAGSHRVVIC NIHVLFNPKR GDFKLGQVRT LLDKAHAVSK LWDDAPIVLC GDFNCTPKSP LYNFISDRKL DLSGLARDKV
401: SGQVSAEFRP PRPENYTTRY QSANKSPQGQ VQPPNLITNA HMENNSNIDV GTAPSEKTSE LPCGDTILAG HEATSSSDQV LPCENMASDC QFGIENRKPD
501: DSGNLSTAED LSSLTISDTE PQHASSARED LNTDRSVSSG LSETEQTPEE ICSSDQDISS SLSTKVDTFV AEMKLDGLKL DEPVVFAQDE ESLGEDGETF
601: LAKLHDNNEN LSQKGELVSE VPLKWSSEAL NSDKITYSPS SWTPMEIATA TGDPERTTVE HALELKSTYS EVEGQANTRD ENGEPVVTSY HRCFMGTVDY
701: IWY

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT5G11350]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.