Factsheet for Bra008968.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69764	Canola	mitochondrion, plastid	96.3	96.43
AT5G11350.4	Thale cress	nucleus	76.62	76.82
VIT_04s0008g04720.t01	Wine grape	mitochondrion	43.99	42.37
KRH16019	Soybean	plastid	46.76	41.55
Solyc08g067420.2.1	Tomato	plastid	42.8	37.11
Bra015956.1-P	Field mustard	plastid	22.06	36.7
Bra022326.1-P	Field mustard	mitochondrion, plastid	21.8	35.79
GSMUA_Achr1P14560_001	Banana	nucleus	34.35	33.72
Zm00001d044447_P007	Maize	mitochondrion	23.51	31.12
KRH05096	Soybean	cytosol	20.48	30.39
EES03263	Sorghum	mitochondrion	34.35	29.82
Os01t0610600-01	Rice	mitochondrion	34.74	29.13
TraesCS3B01G248600.1	Wheat	mitochondrion	35.01	28.93
TraesCS3D01G233900.2	Wheat	mitochondrion	34.74	28.71
TraesCS3A01G218500.4	Wheat	mitochondrion	34.35	28.51
Bra023195.1-P	Field mustard	nucleus	11.89	24.79
Bra038426.1-P	Field mustard	plastid	11.76	23.18
Bra003342.1-P	Field mustard	cytosol	16.25	20.78
Bra007403.1-P	Field mustard	cytosol	15.59	19.77
Bra014566.1-P	Field mustard	cytosol	15.59	19.67
Bra003344.1-P	Field mustard	cytosol	14.53	19.2

Protein Annotations

EnsemblPlants:Bra008968.1	EnsemblPlants:Bra008968.1-P	EnsemblPlantsGene:Bra008968	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	SEG:seg	SUPFAM:SSF56219
UniParc:UPI00025442F1	UniProt:M4CXM1	MapMan:35.1	:	:	:

Description

AT5G11350 (E=0.0) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA10:-:14663553..14667452

Molecular Weight (calculated)

83829.3 Da

IEP (calculated)

6.100

GRAVY (calculated)

-0.667

Length

757 amino acids

Sequence
(BLAST)

001: MRRSRSVVQV FSDAAISNAT TTCAPFVTMS SRPLYGGGRG RARGQGFGQG GRSFSDRPYN DAGGHQFVTG DSHFQSVHDA NFEFRHGNRG VSSSSSLDPR
101: RFNHVQQPPF NQNYQLRPPP PQAQWRPNHP PCGQSYSACP PPPQFYQNQM SRPPPQRSFR QRPRSKPSDY REWEYAKTAP SPGTEKFVVL SYNILADYLA
201: NDHWRNLYFH IPRNMLSWGW RKNKIVFELG LWSADIMCLQ EVDKFQDLEE ELKLRGYSGI WKMRTGNAVD GCAIFWRSNR FKLVQEESIQ FNQLGLRDNV
301: AQICVLEALL NSHAKENEAS PSESCSHRVV VCNIHVLYNP KRGDFKLGQV RTLLERAHAV SKLWDDAPVV LCGDFNCTPK SHLYNFISEG KLDLSGVARN
401: KVSGQESAEI RPPRPEIYTR FQSDNKSPQG QVQPQDSNSI ANARMDNNSN MDVGKTPSIR NTSELPCGDT VLAGHKATSS SVRVLPGEDL SSGCNLGGQN
501: GQPDDAGDLS LAEGLSSVTI SDPELPHTSN ANDDSREKLS ASSVISATEH SPEEIVSNAQ NDSSSLSTKV DTSAEMKLDD LTLDEAGVLA QEEEGIGEDG
601: ETFLAKLHDK NEDLSQTGGL VDELSLKSSS EGFDYGKITY NPASWTPMEI AAATGDPERS TVEHALELKS TYSEIEGKAN TRDENGEPVV TSYHRCFMGT
701: VDYIWRSEGL QTVRVLAPIP KQAMQWTPGF PTPKWGSDHI ALVSELAFCN NKSGPRS

Best Arabidopsis Sequence Match ( AT5G11350.1 )
(BLAST)

001: MRRSRFVAQV FSDVTFADAS TISAPIFTMS TRAPYRGARG RGRGRGGRSF SDRPYNDDAG RDQFVTGDSH FQSVHDANFR FRHGEPYRQH QPPLDQRQQP
101: PFNQNYEFRP PPPSRGQWQQ FRQPNQFPSN QNYAACPPPP FYQNQMSRPP PQQSFRQRPR SKPSDYREWE YAKTPPSPGS EKFVVLSYNI LADYLANDHW
201: RSLYFHIPRN MLSWGWRKSK LVFELSLWSA DIMCLQEVDK FQDLEEEMKH RGYSAIWKMR TGNAVDGCAI FWRSNRFKLV HEESIQFNQL GLRDNVAQIC
301: VLETLLTSHT KENETPPPES SAGSHRVVIC NIHVLFNPKR GDFKLGQVRT LLDKAHAVSK LWDDAPIVLC GDFNCTPKSP LYNFISDRKL DLSGLARDKV
401: SGQVSAEFRP PRPENYTTRY QSANKSPQGQ VQPPNLITNA HMENNSNIDV GTAPSEKTSE LPCGDTILAG HEATSSSDQV LPCENMASDC QFGIENRKPD
501: DSGNLSTAED LSSLTISDTE PQHASSARED LNTDRSVSSG LSETEQTPEE ICSSDQDISS SLSTKVDTFV AEMKLDGLKL DEPVVFAQDE ESLGEDGETF
601: LAKLHDNNEN LSQKGELVSE VPLKWSSEAL NSDKITYSPS SWTPMEIATA TGDPERTTVE HALELKSTYS EVEGQANTRD ENGEPVVTSY HRCFMGTVDY
701: IWRSEGLQTV RVLAPIPKQA MQWTPGFPTP KWGSDHIALV SELAFCSSKT LPKS

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT5G11350]
SUBAcon: [nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.