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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 1
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97099 Canola plastid 76.95 77.26
CDX69764 Canola mitochondrion, plastid 77.35 77.25
Bra008968.1-P Field mustard mitochondrion, plastid 76.82 76.62
VIT_04s0008g04720.t01 Wine grape mitochondrion 45.17 43.38
KRH16019 Soybean plastid 46.09 40.85
AT3G18500.3 Thale cress nucleus 23.44 39.42
Solyc08g067420.2.1 Tomato plastid 43.71 37.8
AT1G73875.1 Thale cress nucleus 22.38 37.22
GSMUA_Achr1P14560_001 Banana nucleus 34.3 33.59
Zm00001d044447_P007 Maize mitochondrion 23.58 31.12
KRH05096 Soybean cytosol 20.66 30.59
EES03263 Sorghum mitochondrion 34.17 29.59
TraesCS3B01G248600.1 Wheat mitochondrion 35.76 29.48
TraesCS3D01G233900.2 Wheat mitochondrion 35.63 29.37
Os01t0610600-01 Rice mitochondrion 35.1 29.35
TraesCS3A01G218500.4 Wheat mitochondrion 34.97 28.95
AT1G31530.1 Thale cress cytosol 8.61 22.97
AT1G31500.7 Thale cress mitochondrion 11.79 21.09
AT3G58580.1 Thale cress cytosol 16.29 20.4
AT3G58560.1 Thale cress cytosol 16.03 20.1
CDX97100 Canola plastid 0.26 0.29
Protein Annotations
Gene3D:3.60.10.10MapMan:35.1EntrezGene:831006UniProt:A0A178UDZ2UniProt:A0A1P8BDV8ProteinID:ANM69795.1
ArrayExpress:AT5G11350EnsemblPlantsGene:AT5G11350RefSeq:AT5G11350TAIR:AT5G11350RefSeq:AT5G11350-TAIR-GEnsemblPlants:AT5G11350.4
Unigene:At.27820InterPro:Endo/exonu/phosph_ase_sfInterPro:Endo/exonuclease/phosphataseInterPro:IPR036691RefSeq:NP_001331448.1ProteinID:OAO91998.1
PFAM:PF03372PANTHER:PTHR12121PANTHER:PTHR12121:SF48SUPFAM:SSF56219UniParc:UPI0007DED748SEG:seg
Description
DNAse I-like superfamily protein [Source:TAIR;Acc:AT5G11350]
Coordinates
chr5:+:3621519..3625412
Molecular Weight (calculated)
85057.8 Da
IEP (calculated)
5.637
GRAVY (calculated)
-0.733
Length
755 amino acids
Sequence
(BLAST)
001: MRRSRFVAQV FSDVTFADAS TISAPIFTMS TRAPQYRGAR GRGRGRGGRS FSDRPYNDDA GRDQFVTGDS HFQSVHDANF RFRHGEPYRQ HQPPLDQRQQ
101: PPFNQNYEFR PPPPSRGQWQ QFRQPNQFPS NQNYAACPPP PFYQNQMSRP PPQQSFRQRP RSKPSDYREW EYAKTPPSPG SEKFVVLSYN ILADYLANDH
201: WRSLYFHIPR NMLSWGWRKS KLVFELSLWS ADIMCLQEVD KFQDLEEEMK HRGYSAIWKM RTGNAVDGCA IFWRSNRFKL VHEESIQFNQ LGLRDNVAQI
301: CVLETLLTSH TKENETPPPE SSAGSHRVVI CNIHVLFNPK RGDFKLGQVR TLLDKAHAVS KLWDDAPIVL CGDFNCTPKS PLYNFISDRK LDLSGLARDK
401: VSGQVSAEFR PPRPENYTTR YQSANKSPQG QVQPPNLITN AHMENNSNID VGTAPSEKTS ELPCGDTILA GHEATSSSDQ VLPCENMASD CQFGIENRKP
501: DDSGNLSTAE DLSSLTISDT EPQHASSARE DLNTDRSVSS GLSETEQTPE EICSSDQDIS SSLSTKVDTF VAEMKLDGLK LDEPVVFAQD EESLGEDGET
601: FLAKLHDNNE NLSQKGELVS EVPLKWSSEA LNSDKITYSP SSWTPMEIAT ATGDPERTTV EHALELKSTY SEVEGQANTR DENGEPVVTS YHRCFMGTVD
701: YIWRSEGLQT VRVLAPIPKQ AMQWTPGFPT PKWGSDHIAL VSELAFCSSK TLPKS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.