Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- vacuole 1
- nucleus 1
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023195.1-P | Field mustard | nucleus | 74.64 | 86.78 |
| Bra038426.1-P | Field mustard | plastid | 77.73 | 85.42 |
| CDY27147 | Canola | plastid | 77.73 | 84.97 |
| CDY12415 | Canola | plastid | 74.88 | 84.95 |
| CDY12304 | Canola | plastid | 79.38 | 83.75 |
| CDY62302 | Canola | mitochondrion, plastid | 78.91 | 77.44 |
| VIT_02s0087g00390.t01 | Wine grape | mitochondrion | 59.0 | 63.36 |
| PGSC0003DMT400040652 | Potato | cytosol, plastid | 52.37 | 60.71 |
| Solyc08g075010.2.1 | Tomato | mitochondrion | 52.61 | 57.07 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.71 | 55.52 |
| Os05t0389500-02 | Rice | mitochondrion | 48.58 | 52.7 |
| EES19469 | Sorghum | plastid | 48.82 | 52.42 |
| TraesCS1B01G254600.1 | Wheat | mitochondrion | 47.87 | 51.01 |
| TraesCS1D01G243100.1 | Wheat | mitochondrion | 47.63 | 50.76 |
| TraesCS1A01G243100.1 | Wheat | mitochondrion | 47.63 | 50.76 |
| Zm00001d038091_P006 | Maize | plastid | 49.29 | 50.61 |
| AT1G31530.1 | Thale cress | cytosol | 32.46 | 48.41 |
| AT3G18500.3 | Thale cress | nucleus | 22.04 | 20.71 |
| AT1G73875.1 | Thale cress | nucleus | 20.62 | 19.16 |
| AT3G58560.1 | Thale cress | cytosol | 25.36 | 17.77 |
| AT3G58580.1 | Thale cress | cytosol | 24.64 | 17.25 |
| AT5G11350.4 | Thale cress | nucleus | 21.09 | 11.79 |
Protein Annotations
| ArrayExpress:AT1G31500 | EnsemblPlants:AT1G31500.7 | EnsemblPlantsGene:AT1G31500 | EntrezGene:840040 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf |
| InterPro:Endo/exonuclease/phosphatase | InterPro:IPR036691 | PANTHER:PTHR12121 | PANTHER:PTHR12121:SF42 | PFAM:PF03372 | ProteinID:ANM61088.1 |
| RefSeq:AT1G31500 | RefSeq:AT1G31500-TAIR-G | RefSeq:NP_001323328.1 | SEG:seg | SUPFAM:SSF56219 | TAIR:AT1G31500 |
| UniParc:UPI0008485EF6 | UniProt:A0A1P8AWP4 | MapMan:35.1 | : | : | : |
Description
DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
Coordinates
chr1:-:11273602..11276628
Molecular Weight (calculated)
47619.9 Da
IEP (calculated)
7.021
GRAVY (calculated)
-0.241
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSSTTLHHL PRPNLLLPSS RVCRKVISRR MSTNPAIEPK VRKFESVEGV DIGSRNKSDG FFAIPLYLSK LVALYNCISL SRIGTSNENF VFSGIRFRLV
101: SYNILAQVYV KSALLPHSPP ACLKWKARSH AILSVLKNLQ ADFFCLQEVD EYDSFYRNNM DSLGYSGIYI QRTGQRKRDG CAIFYKPSCA ELVTKERIEY
201: NDLVDSIKAD SVSCSEQKIE TSNEGKDSRK DSRDLNDPLV RLKRDCVGIM AAFRINKPFQ HIVIVANTHL YWDPELADVK LAQAKYLLSR LAQFKTLISD
301: EFECTPSLLL AGDFNSIPGD MVYSYLVSGN AKPTETIEEE EAPVPLSSVY EVTRGEPKFT NCTPGFTNTL DYIFISPSDF IKPVSILQLP EPDSPDVVGF
401: LPNHHHPSDH LPIGAEFEIR RE
101: SYNILAQVYV KSALLPHSPP ACLKWKARSH AILSVLKNLQ ADFFCLQEVD EYDSFYRNNM DSLGYSGIYI QRTGQRKRDG CAIFYKPSCA ELVTKERIEY
201: NDLVDSIKAD SVSCSEQKIE TSNEGKDSRK DSRDLNDPLV RLKRDCVGIM AAFRINKPFQ HIVIVANTHL YWDPELADVK LAQAKYLLSR LAQFKTLISD
301: EFECTPSLLL AGDFNSIPGD MVYSYLVSGN AKPTETIEEE EAPVPLSSVY EVTRGEPKFT NCTPGFTNTL DYIFISPSDF IKPVSILQLP EPDSPDVVGF
401: LPNHHHPSDH LPIGAEFEIR RE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.