Factsheet for TraesCS1A01G243100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G243100.1	Wheat	mitochondrion	96.97	96.97
TraesCS1B01G254600.1	Wheat	mitochondrion	95.96	95.96
Os05t0389500-02	Rice	mitochondrion	80.3	81.75
EES19469	Sorghum	plastid	76.26	76.84
Zm00001d038091_P006	Maize	plastid	75.25	72.51
GSMUA_AchrUn_...	Banana	cytosol	49.49	61.83
Bra023195.1-P	Field mustard	nucleus	50.0	54.55
PGSC0003DMT400040652	Potato	cytosol, plastid	50.0	54.4
VIT_02s0087g00390.t01	Wine grape	mitochondrion	53.54	53.94
Bra038426.1-P	Field mustard	plastid	51.26	52.86
CDY12415	Canola	plastid	49.24	52.42
CDY27147	Canola	plastid	51.01	52.33
Solyc08g075010.2.1	Tomato	mitochondrion	50.51	51.41
KRH39729	Soybean	plastid	50.51	51.15
CDY12304	Canola	plastid	51.26	50.75
KRH76418	Soybean	nucleus	37.12	50.69
CDY62302	Canola	mitochondrion, plastid	52.53	48.37
AT1G31500.7	Thale cress	mitochondrion	50.76	47.63
AT1G31530.1	Thale cress	cytosol	28.54	39.93
TraesCS7A01G206900.2	Wheat	plastid	21.46	19.02
TraesCS1A01G137900.1	Wheat	cytosol	23.74	15.54
TraesCS3A01G218500.4	Wheat	mitochondrion	20.2	8.77

Protein Annotations

EnsemblPlants:TraesCS1A01G243100.1	EnsemblPlantsGene:TraesCS1A01G243100	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691
PANTHER:PTHR12121	PANTHER:PTHR12121:SF42	PFAM:PF03372	SEG:seg	SUPFAM:SSF56219	MapMan:35.1

Description

No Description!

Coordinates

chr1A:-:431017783..431031301

Molecular Weight (calculated)

43856.2 Da

IEP (calculated)

7.993

GRAVY (calculated)

-0.369

Length

396 amino acids

Sequence
(BLAST)

001: MLLKPQAIWA ASLPLFLGRR LLPSSSPPPS GRRLPFRPIC KRRMSAQAEP RFAPLPTAQS EPDAGADGYQ FRLVSYNILA QVYVKSAFFP HSPSASLKWK
101: ARSKAVLTEL KSFNADLMCI QELDEYETFY RKNMESTGYS SIYVQRSGDK RDGCGIFYKP KSVELLQKEV IHYNDLVETC HLNDNVISAP SNNSSPSEES
201: SGKEDNKKRG DPNDPRVRLK RDCVGLLAAF KLGDPCEHIL IVANTHIYWD PEWIDVKLAQ AKYLLSKVSE FEKIIANKFT CKPSVIIAGD FNSTPGDKVY
301: NYLVSAGSES TDEALIKLRS LYAENGGEPE FTNCTPGFTG TLDYIFLSEG GSIKPTSLLR IPRGGSPDVE GGLPNFHHPS EHLPIGAGFQ VLRASA

Best Arabidopsis Sequence Match ( AT1G31500.5 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPRK VISRRMSTNP AIEPKVRKFE SVEGVDIGSR NKSDGIRFRL VSYNILAQVY VKSALLPHSP PACLKWKARS HAILSVLKNL
101: QADFFCLQEV DEYDSFYRNN MDSLGYSGIY IQRTGQRKRD GCAIFYKPSC AELVTKERIE YNDLVDSIKA DSVSCSEQKI ETSNEGKDSR KDSRDLNDPL
201: VRLKRDCVGI MAAFRINKPF QHIVIVANTH LYWDPELADV KLAQAKYLLS RLAQFKTLIS DEFECTPSLL LAGDFNSIPG DMVYSYLVSG NAKPTETIEE
301: EEAPVPLSSV YEVTRGEPKF TNCTPGFTNT LDYIFISPSD FIKPVSILQL PEPDSPDVVG FLPNHHHPSD HLPIGAEFEI RRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.