Factsheet for GSMUA_AchrUn_randomP19510_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0389500-02	Rice	mitochondrion	63.72	51.93
EES19469	Sorghum	plastid	63.09	50.89
PGSC0003DMT400040652	Potato	cytosol, plastid	58.04	50.55
TraesCS1D01G243100.1	Wheat	mitochondrion	62.78	50.25
TraesCS1B01G254600.1	Wheat	mitochondrion	62.46	50.0
TraesCS1A01G243100.1	Wheat	mitochondrion	61.83	49.49
Zm00001d038091_P006	Maize	plastid	64.04	49.39
KRH76418	Soybean	nucleus	44.8	48.97
VIT_02s0087g00390.t01	Wine grape	mitochondrion	60.25	48.6
Bra023195.1-P	Field mustard	nucleus	54.26	47.38
Solyc08g075010.2.1	Tomato	mitochondrion	57.73	47.04
Bra038426.1-P	Field mustard	plastid	56.15	46.35
CDY27147	Canola	plastid	56.15	46.11
CDY12415	Canola	plastid	53.63	45.7
KRH39729	Soybean	plastid	55.84	45.27
CDY12304	Canola	plastid	54.57	43.25
AT1G31500.7	Thale cress	mitochondrion	55.52	41.71
CDY62302	Canola	mitochondrion, plastid	54.57	40.23
AT1G31530.1	Thale cress	cytosol	34.7	38.87
GSMUA_Achr7P12580_001	Banana	mitochondrion	24.61	24.22
GSMUA_Achr6P09650_001	Banana	nucleus	23.97	16.1
GSMUA_Achr9P25420_001	Banana	cytosol	26.81	14.58
GSMUA_Achr4P17200_001	Banana	cytosol	26.81	14.55
GSMUA_Achr9P11040_001	Banana	cytosol, peroxisome, vacuole	25.55	14.04
GSMUA_Achr6P29710_001	Banana	endoplasmic reticulum, golgi	23.97	10.41
GSMUA_Achr1P14560_001	Banana	nucleus	21.77	8.95

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP19510_001	EnsemblPlants:GSMUA_AchrUn_randomT19510_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG19510_001	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF42	PFAM:PF03372	SUPFAM:SSF56219	UniParc:UPI000296E344
UniProt:M0UAL0	MapMan:35.1	:	:	:	:

Description

Carbon catabolite repressor protein 4 homolog 4 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19510_001]

Coordinates

chrchrUn_random:-:93555600..93566966

Molecular Weight (calculated)

35643.1 Da

IEP (calculated)

5.332

GRAVY (calculated)

-0.268

Length

317 amino acids

Sequence
(BLAST)

001: MHWTPDLDLQ VYVKSSYFQH SPSSCLKWKA RSQAILMDFK NFDADFLCIQ ELDEYSTFYK SNMENLGYLS LYIKRSGQKR DGCGIFYKPS SAQLLQMEEI
101: DYNDLVNCAS ALNEIGNNKV LDLETRDAPI EELSRKHQSD DPHVRLKRDC VGLLPAFQLN DSSNHIIVVA NTHIYWDPNW ADIKLAQVKY LLSRLSQFKE
201: LVSNKFTCIP SVLVAGDFNS TPGDEVYRYL VSASEVAPIQ LRSLYAAHGG EPTFTNCTPD FTGTLDYIFL SGSRLRAVSL LEVPGPESAD VIGGLPNHHH
301: PSDHLPIGAD FSVLQSP

Best Arabidopsis Sequence Match ( AT1G31500.5 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPRK VISRRMSTNP AIEPKVRKFE SVEGVDIGSR NKSDGIRFRL VSYNILAQVY VKSALLPHSP PACLKWKARS HAILSVLKNL
101: QADFFCLQEV DEYDSFYRNN MDSLGYSGIY IQRTGQRKRD GCAIFYKPSC AELVTKERIE YNDLVDSIKA DSVSCSEQKI ETSNEGKDSR KDSRDLNDPL
201: VRLKRDCVGI MAAFRINKPF QHIVIVANTH LYWDPELADV KLAQAKYLLS RLAQFKTLIS DEFECTPSLL LAGDFNSIPG DMVYSYLVSG NAKPTETIEE
301: EEAPVPLSSV YEVTRGEPKF TNCTPGFTNT LDYIFISPSD FIKPVSILQL PEPDSPDVVG FLPNHHHPSD HLPIGAEFEI RRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.