Factsheet for Bra038426.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27147	Canola	plastid	98.44	97.93
CDY12415	Canola	plastid	93.75	96.77
Bra023195.1-P	Field mustard	nucleus	81.25	85.95
AT1G31500.7	Thale cress	mitochondrion	85.42	77.73
VIT_02s0087g00390.t01	Wine grape	mitochondrion	65.1	63.61
PGSC0003DMT400040652	Potato	cytosol, plastid	57.29	60.44
KRH39729	Soybean	plastid	60.94	59.85
KRH76418	Soybean	nucleus	43.23	57.24
GSMUA_AchrUn_...	Banana	cytosol	46.35	56.15
Solyc08g075010.2.1	Tomato	mitochondrion	56.77	56.04
Os05t0389500-02	Rice	mitochondrion	52.86	52.19
EES19469	Sorghum	plastid	53.12	51.91
TraesCS1A01G243100.1	Wheat	mitochondrion	52.86	51.26
TraesCS1D01G243100.1	Wheat	mitochondrion	52.6	51.01
TraesCS1B01G254600.1	Wheat	mitochondrion	52.34	50.76
Zm00001d038091_P006	Maize	plastid	52.6	49.15
Bra015956.1-P	Field mustard	plastid	22.92	19.34
Bra022326.1-P	Field mustard	mitochondrion, plastid	22.14	18.44
Bra003342.1-P	Field mustard	cytosol	27.86	18.07
Bra007403.1-P	Field mustard	cytosol	25.78	16.58
Bra014566.1-P	Field mustard	cytosol	25.78	16.5
Bra003344.1-P	Field mustard	cytosol	24.22	16.23
Bra008968.1-P	Field mustard	mitochondrion, plastid	23.18	11.76

Protein Annotations

EnsemblPlants:Bra038426.1	EnsemblPlants:Bra038426.1-P	EnsemblPlantsGene:Bra038426	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF42	PFAM:PF03372	SUPFAM:SSF56219	UniParc:UPI0002546761
UniProt:M4FBG0	MapMan:35.1	:	:	:	:

Description

AT1G31500 (E=6e-185) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA08:+:8854684..8857141

Molecular Weight (calculated)

43660.2 Da

IEP (calculated)

6.252

GRAVY (calculated)

-0.347

Length

384 amino acids

Sequence
(BLAST)

001: MFNNTLLLHL PRPILPSFTS CRASRRILSK RMTTAMDPKV GKFESVEGAD LNSISKPDGI RFRLVSYNIL AQVYVKSSFF PHSPPACLKW KARSHAILSV
101: LKKLQADFFC LQEVDEYDSF YRKNMESLGY SGIYIQRTGQ RKRDGCAIFY KPSCAELVTK ERIEYNDLLD EQKIETSNEA KGDEKEAKDS QKDSRDLNDP
201: QVRLKRDCVG IMAAFRINKP FHHIVIVANT HLYWDPELAD VKLAQAKYLL SRLAQFKTLI SDEFECTPSL LLAGDFNSIP GDMVYSYLVS GYKKPADIEE
301: EEVAPIPMCS VYEVTRGEPK FTNCTPGFTN TLDYIFFSPS DFIKPVSILQ LPEPESPDVV GFLPNDHHPS DHLPIGAEFE ISRE

Best Arabidopsis Sequence Match ( AT1G31500.1 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPSS RVCRKVISRR MSTNPAIEPK VRKFESVEGV DIGSRNKSDG IRFRLVSYNI LAQVYVKSAL LPHSPPACLK WKARSHAILS
101: VLKNLQADFF CLQEVDEYDS FYRNNMDSLG YSGIYIQRTG QRKRDGCAIF YKPSCAELVT KERIEYNDLV DSIKADSVSC SEQKIETSNE GKDSRKDSRD
201: LNDPLVRLKR DCVGIMAAFR INKPFQHIVI VANTHLYWDP ELADVKLAQA KYLLSRLAQF KTLISDEFEC TPSLLLAGDF NSIPGDMVYS YLVSGNAKPT
301: ETIEEEEAPV PLSSVYEVTR GEPKFTNCTP GFTNTLDYIF ISPSDFIKPV SILQLPEPDS PDVVGFLPNH HHPSDHLPIG AEFEIRRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.