Factsheet for Bra003344.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67753	Canola	cytosol	99.65	95.17
Bra014566.1-P	Field mustard	cytosol	94.24	90.0
Bra007403.1-P	Field mustard	cytosol	90.23	86.6
AT3G58580.1	Thale cress	cytosol	91.1	86.57
KRH71803	Soybean	cytosol	26.53	82.61
Bra003342.1-P	Field mustard	cytosol	76.61	74.16
PGSC0003DMT400029795	Potato	cytosol	77.31	73.22
VIT_08s0007g07020.t01	Wine grape	cytosol	76.96	73.13
KRG96349	Soybean	cytosol	75.92	72.5
KRH38033	Soybean	cytosol	75.74	72.33
KRH68083	Soybean	cytosol	75.57	71.93
Solyc10g078950.1.1	Tomato	cytosol	70.33	71.84
Os10t0412100-01	Rice	cytosol	73.12	69.26
Solyc03g059010.2.1	Tomato	cytosol, nucleus, plastid	71.2	68.69
HORVU1Hr1G035390.1	Barley	cytosol	72.25	68.43
TraesCS1D01G134400.1	Wheat	cytosol	72.25	68.43
TraesCS1B01G153300.2	Wheat	cytosol	72.25	68.43
TraesCS1A01G137900.1	Wheat	cytosol	72.25	68.43
OQU91798	Sorghum	cytosol	71.73	67.82
GSMUA_Achr4P17200_001	Banana	cytosol	69.11	67.81
Zm00001d032979_P003	Maize	cytosol	71.55	67.77
GSMUA_Achr9P25420_001	Banana	cytosol	68.94	67.75
Os03t0166800-01	Rice	cytosol	71.2	67.22
KRH71804	Soybean	cytosol	44.68	66.84
Zm00001d014187_P011	Maize	cytosol	70.33	66.83
KXG40109	Sorghum	mitochondrion	71.55	66.13
GSMUA_Achr9P11040_001	Banana	cytosol, peroxisome, vacuole	66.49	66.03
Zm00001d027811_P001	Maize	mitochondrion	70.86	63.04
GSMUA_Achr6P29710_001	Banana	endoplasmic reticulum, golgi	61.78	48.49
Bra023195.1-P	Field mustard	nucleus	16.4	25.9
Bra038426.1-P	Field mustard	plastid	16.23	24.22
Bra015956.1-P	Field mustard	plastid	19.2	24.18
Bra022326.1-P	Field mustard	mitochondrion, plastid	18.15	22.56
Bra008968.1-P	Field mustard	mitochondrion, plastid	19.2	14.53

Protein Annotations

EnsemblPlants:Bra003344.1	EnsemblPlants:Bra003344.1-P	EnsemblPlantsGene:Bra003344	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	InterPro:Zfn-C6H2	PANTHER:PTHR12121	PANTHER:PTHR12121:SF29	PFAM:PF03372	PFAM:PF15801
SEG:seg	SUPFAM:SSF56219	UniParc:UPI0002541699	UniProt:M4CGL1	MapMan:16.8.2.1.2.1	:

Description

AT3G58580 (E=1e-170) | hydrolase

Coordinates

chrA07:-:12713296..12716116

Molecular Weight (calculated)

63585.0 Da

IEP (calculated)

7.280

GRAVY (calculated)

-0.240

Length

573 amino acids

Sequence
(BLAST)

001: MLSVIRVHLP SEIPIVGCEL TPYVLVRRPD KSAATDDVPE SAPLDGYFLR YRWYRVQSDK KVTICSVHPT QQATLQCVFC SKRKALVSKS YHCSPKCFVD
101: AWQHHKTLHE RAAAENGNEE DDQLVRFNST GSGVLSGTLS GSMSNLNLAG NGPTPFYPSS ITQKSGGETL VEVGSCKTYT PTADDIGYVL KFECVVANAE
201: SKQVVGHPST ILTSRVIPAP SPSPRKLIPV NGADVMGHLD QDGRIQSAGS FTVLSYNILS DTSASSDLYS YCPPWALSWS YRRHNLLREI VGYRADVVCL
301: QEVQSDHFHE IFAPELDKHG YQALYKRKTN EVEFNKAAQS LTEAIIPPTQ KRTALNRLVK DNIALIVVLE AKFGNQPVDS SGKRQLICVA NTHVNVQQEL
401: KDVKLWQVHT LLKGLEKIAA SADIPILVCG DFNTLPGSAP HTLLVMGKVD PLHPDLLVDP LGILRPQTKL THQLPLVSAY SSFVRPGTGL GLEQHRRRMD
501: LNTNEPLFTN CTRDFIGTHD YIFYTADTLM VESLLELLDE DGLRKDTALP SPEWSSNHIA LLAEFRCMPR TRR

Best Arabidopsis Sequence Match ( AT3G58580.1 )
(BLAST)

001: MLSVIRVHLP SEIPIVGCEL TPYVLVRRPD KNSTTDDVPE SAPLEGYFLR YRWYRVQSDK KVTICSVHPT EQATLQCVFC SKRRSLVPKS YHCSPKCFTD
101: AWQHHRTLHE RAAAENNANE DDDLNRNNSA GSGSLAGSLS GSMSNLSIAN NGPAPFYPSN ITQKNGGETL VEVGGCKTYT PTADDISHVL KFECVVANAE
201: TKQIVGHPST ILTSRVIPAP SPSPRKLIPV NGADGMGHLD QDARIQSAGS FTVLSYNILS DTSASSDLYS YCPPWALSWP YRRQNLLREI VGYRADVVCL
301: QEVQSDHFHE IFAPELDKHG YQALYKRKTN EVLSGSTSAI DGCATFFRRD RFSHVKKYDV EFNKAAQSLT DALIPQAQKR TALNRLVKDN IALIVVLEAK
401: FGNQPTDPSG KRQLICVANT HVNVQQDLKD VKLWQVHTLL KGLEKIAASA DIPMLVCGDF NTLPGSAPHT LLVMGKVDPM HPDLAVDPLN ILRPHTKLTH
501: QLPLVSAYSS FVRKGIMGLG LEQHRRRIDL NTNEPLFTNC TRDFIGTHDY IFYTADTLMV ESLLELLDED GLRKDTALPS PEWSSNHIAL LAEFRCTPRT
601: RRG

Arabidopsis Description

CCR4-2Carbon catabolite repressor protein 4 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2F8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.