Factsheet for Bra007403.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49233	Canola	cytosol	99.83	99.33
CDX71943	Canola	cytosol	99.67	98.84
Bra014566.1-P	Field mustard	cytosol	91.29	90.83
Bra003344.1-P	Field mustard	cytosol	86.6	90.23
AT3G58580.1	Thale cress	cytosol	89.45	88.56
KRH71803	Soybean	cytosol	25.13	81.52
Bra003342.1-P	Field mustard	cytosol	76.21	76.86
VIT_08s0007g07020.t01	Wine grape	cytosol	76.21	75.46
PGSC0003DMT400029795	Potato	cytosol	76.05	75.04
Solyc10g078950.1.1	Tomato	cytosol	69.68	74.15
KRH38033	Soybean	cytosol	74.04	73.67
KRG96349	Soybean	cytosol	73.53	73.17
KRH68083	Soybean	cytosol	73.03	72.43
GSMUA_Achr9P25420_001	Banana	cytosol	69.18	70.84
GSMUA_Achr4P17200_001	Banana	cytosol	69.18	70.72
TraesCS1D01G134400.1	Wheat	cytosol	71.52	70.58
TraesCS1B01G153300.2	Wheat	cytosol	71.52	70.58
TraesCS1A01G137900.1	Wheat	cytosol	71.52	70.58
Solyc03g059010.2.1	Tomato	cytosol, nucleus, plastid	70.18	70.54
Os10t0412100-01	Rice	cytosol	71.36	70.41
OQU91798	Sorghum	cytosol	71.36	70.3
HORVU1Hr1G035390.1	Barley	cytosol	71.19	70.25
Zm00001d032979_P003	Maize	cytosol	71.02	70.08
Os03t0166800-01	Rice	cytosol	71.02	69.85
KRH71804	Soybean	cytosol	44.72	69.71
Zm00001d014187_P011	Maize	cytosol	69.85	69.15
GSMUA_Achr9P11040_001	Banana	cytosol, peroxisome, vacuole	66.67	68.98
KXG40109	Sorghum	mitochondrion	70.02	67.42
Zm00001d027811_P001	Maize	mitochondrion	69.51	64.44
GSMUA_Achr6P29710_001	Banana	endoplasmic reticulum, golgi	62.65	51.23
Bra023195.1-P	Field mustard	nucleus	16.75	27.55
Bra038426.1-P	Field mustard	plastid	16.58	25.78
Bra015956.1-P	Field mustard	plastid	18.09	23.74
Bra022326.1-P	Field mustard	mitochondrion, plastid	18.09	23.43
Bra008968.1-P	Field mustard	mitochondrion, plastid	19.77	15.59

Protein Annotations

EnsemblPlants:Bra007403.1	EnsemblPlants:Bra007403.1-P	EnsemblPlantsGene:Bra007403	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	InterPro:Zfn-C6H2	PANTHER:PTHR12121	PANTHER:PTHR12121:SF29	PFAM:PF03372	PFAM:PF15801
SEG:seg	SUPFAM:SSF56219	UniParc:UPI0002542DDF	UniProt:M4CT61	MapMan:16.8.2.1.2.1	:

Description

AT3G58580 (E=6e-293) | hydrolase

Coordinates

chrA09:-:29013124..29015836

Molecular Weight (calculated)

66398.2 Da

IEP (calculated)

7.422

GRAVY (calculated)

-0.270

Length

597 amino acids

Sequence
(BLAST)

001: MLSVIRVHLP SEIPIVGCEL TPYVLVRRPD KSAATEDVPE SSPLEGYFLR YRWFRVQSDK KVTICSVHPT EQATLQCVFC SKRPALVSKS YHCSPKCFTD
101: AWQHHKTLHE RAAAENGNNE EDNNNDLSRA NSAASGVLAS TLSSLNGPPT PFYPSSIAQK NGGETLVEVG GCKTYTPTAD DIGYVLKFEC VVAVAESKQS
201: VGHPSTIMTS RVIPAPSPRP RRLIPVNGAD VVGGHLDQDG RIQSAGSFTV LSYNILSDTS ASSELYSYCP TWALSWPYRR QNLLREIVAY RADVVCLQEV
301: QSDHFHEIFA PELDKHGYQA LYKRKTNEVL SGSTSAIDGC ATFFRRDRFA HVKKYDVEFN KAAQSLTEAI IPPAQKRSAL NRLVKDNIAL IVVLEAKFGN
401: HQPTDGKRQL ICVANTHVNV QQELKDVKLW QVHTLLKGLE KIAASADIPM LVCGDFNTLP GSAPHSLLVY GKVDPQHPDL LVDPLGILRP QTKLTHQLPL
501: VSAYSSFVRS VMGIGLEQHR RKMDLNTNEP LFTNCTRDFI GTHDYIFYTA DTLMVESLLE LLDEDGLRKD TALPSPEWSS SHIALLAEFR CMPRTRR

Best Arabidopsis Sequence Match ( AT3G58580.1 )
(BLAST)

001: MLSVIRVHLP SEIPIVGCEL TPYVLVRRPD KNSTTDDVPE SAPLEGYFLR YRWYRVQSDK KVTICSVHPT EQATLQCVFC SKRRSLVPKS YHCSPKCFTD
101: AWQHHRTLHE RAAAENNANE DDDLNRNNSA GSGSLAGSLS GSMSNLSIAN NGPAPFYPSN ITQKNGGETL VEVGGCKTYT PTADDISHVL KFECVVANAE
201: TKQIVGHPST ILTSRVIPAP SPSPRKLIPV NGADGMGHLD QDARIQSAGS FTVLSYNILS DTSASSDLYS YCPPWALSWP YRRQNLLREI VGYRADVVCL
301: QEVQSDHFHE IFAPELDKHG YQALYKRKTN EVLSGSTSAI DGCATFFRRD RFSHVKKYDV EFNKAAQSLT DALIPQAQKR TALNRLVKDN IALIVVLEAK
401: FGNQPTDPSG KRQLICVANT HVNVQQDLKD VKLWQVHTLL KGLEKIAASA DIPMLVCGDF NTLPGSAPHT LLVMGKVDPM HPDLAVDPLN ILRPHTKLTH
501: QLPLVSAYSS FVRKGIMGLG LEQHRRRIDL NTNEPLFTNC TRDFIGTHDY IFYTADTLMV ESLLELLDED GLRKDTALPS PEWSSNHIAL LAEFRCTPRT
601: RRG

Arabidopsis Description

CCR4-2Carbon catabolite repressor protein 4 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2F8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.