Factsheet for Bra023195.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12304	Canola	plastid	97.8	88.75
CDY62302	Canola	mitochondrion, plastid	99.45	83.95
Bra038426.1-P	Field mustard	plastid	85.95	81.25
AT1G31500.7	Thale cress	mitochondrion	86.78	74.64
VIT_02s0087g00390.t01	Wine grape	mitochondrion	65.01	60.05
PGSC0003DMT400040652	Potato	cytosol, plastid	60.06	59.89
KRH39729	Soybean	plastid	62.53	58.06
KRH76418	Soybean	nucleus	44.63	55.86
Solyc08g075010.2.1	Tomato	mitochondrion	58.95	55.01
GSMUA_AchrUn_...	Banana	cytosol	47.38	54.26
Os05t0389500-02	Rice	mitochondrion	54.82	51.16
EES19469	Sorghum	plastid	54.82	50.64
TraesCS1B01G254600.1	Wheat	mitochondrion	54.55	50.0
TraesCS1A01G243100.1	Wheat	mitochondrion	54.55	50.0
TraesCS1D01G243100.1	Wheat	mitochondrion	54.27	49.75
Zm00001d038091_P006	Maize	plastid	55.1	48.66
Bra015956.1-P	Field mustard	plastid	23.69	18.9
Bra022326.1-P	Field mustard	mitochondrion, plastid	22.86	18.0
Bra003342.1-P	Field mustard	cytosol	28.93	17.74
Bra007403.1-P	Field mustard	cytosol	27.55	16.75
Bra014566.1-P	Field mustard	cytosol	27.55	16.67
Bra003344.1-P	Field mustard	cytosol	25.9	16.4
Bra008968.1-P	Field mustard	mitochondrion, plastid	24.79	11.89

Protein Annotations

EnsemblPlants:Bra023195.1	EnsemblPlants:Bra023195.1-P	EnsemblPlantsGene:Bra023195	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF42	PFAM:PF03372	SEG:seg	SUPFAM:SSF56219
UniParc:UPI00025423E9	UniProt:M4E344	MapMan:35.1	:	:	:

Description

AT1G31500 (E=9e-173) | endonuclease/exonuclease/phosphatase family protein

Coordinates

chrA09:+:20842562..20844672

Molecular Weight (calculated)

40990.5 Da

IEP (calculated)

5.466

GRAVY (calculated)

-0.420

Length

363 amino acids

Sequence
(BLAST)

001: MSTNPPVEPK VRRFESVEEA DDMHSISKSD GIRFRLVSYN ILAQVYVKSS LLPHSPPACL KWKARSHAIL GVLKKLEADF FCLQEVDEYD SFYRKNMDSL
101: GYSGIYIQRT GQRKRDGCAI FYKPSCAELV AKERIEYNDL LDSVKADSVQ ETETSNESKG DEHAKDSRKD SRDLNDPLVR LKRDCVGIMA AFKINKPFHH
201: VVIVANTHLY WDPELADVKL AQAKYLLSRL DQFRTLISNE FECTPSLLLS GDFNSIPGDK VYSYLVSGNG KPAEAIEEEV EAPVPLCSAY EVTRGEPKFT
301: NCTPGFTNTL DYIFFSPSDF IKPVSILQLP EPESPDVVGF LPNNHHPSDH LPIGAEFEIS RNR

Best Arabidopsis Sequence Match ( AT1G31500.5 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPRK VISRRMSTNP AIEPKVRKFE SVEGVDIGSR NKSDGIRFRL VSYNILAQVY VKSALLPHSP PACLKWKARS HAILSVLKNL
101: QADFFCLQEV DEYDSFYRNN MDSLGYSGIY IQRTGQRKRD GCAIFYKPSC AELVTKERIE YNDLVDSIKA DSVSCSEQKI ETSNEGKDSR KDSRDLNDPL
201: VRLKRDCVGI MAAFRINKPF QHIVIVANTH LYWDPELADV KLAQAKYLLS RLAQFKTLIS DEFECTPSLL LAGDFNSIPG DMVYSYLVSG NAKPTETIEE
301: EEAPVPLSSV YEVTRGEPKF TNCTPGFTNT LDYIFISPSD FIKPVSILQL PEPDSPDVVG FLPNHHHPSD HLPIGAEFEI RRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.