CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39729	Soybean	plastid	88.97	65.98
PGSC0003DMT400040652	Potato	cytosol, plastid	59.66	47.53
VIT_02s0087g00390.t01	Wine grape	mitochondrion	64.14	47.33
GSMUA_AchrUn_...	Banana	cytosol	48.97	44.8
Bra023195.1-P	Field mustard	nucleus	55.86	44.63
Solyc08g075010.2.1	Tomato	mitochondrion	58.97	43.96
Bra038426.1-P	Field mustard	plastid	57.24	43.23
CDY27147	Canola	plastid	57.24	43.01
CDY12415	Canola	plastid	54.14	42.2
CDY12304	Canola	plastid	56.55	41.0
EES19469	Sorghum	plastid	54.48	40.2
Zm00001d038091_P006	Maize	plastid	54.83	38.69
Os05t0389500-02	Rice	mitochondrion	51.38	38.3
CDY62302	Canola	mitochondrion, plastid	56.21	37.91
TraesCS1A01G243100.1	Wheat	mitochondrion	50.69	37.12
TraesCS1D01G243100.1	Wheat	mitochondrion	50.69	37.12
TraesCS1B01G254600.1	Wheat	mitochondrion	50.34	36.87
AT1G31530.1	Thale cress	cytosol	33.79	34.63
KRH71803	Soybean	cytosol	18.97	29.89
KRH48475	Soybean	cytosol	20.34	20.56
KRH41616	Soybean	cytosol	20.69	16.35
KRH39200	Soybean	nucleus, plastid	23.45	15.89
KRH60320	Soybean	plastid	23.79	15.86
KRH38033	Soybean	cytosol	25.52	12.33
KRH68083	Soybean	cytosol	25.52	12.29
KRG96349	Soybean	cytosol	24.83	12.0
KRH05096	Soybean	cytosol	13.45	7.65
KRH16019	Soybean	plastid	21.38	7.28
KRH71804	Soybean	cytosol	4.83	3.66

Protein Annotations

EMBL:ACUP02000611	EnsemblPlants:KRH76418	EnsemblPlantsGene:GLYMA_01G151500	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691
PANTHER:PTHR12121	PANTHER:PTHR12121:SF42	PFAM:PF03372	ProteinID:KRH76418	ProteinID:KRH76418.1	SUPFAM:SSF56219
UniParc:UPI0006EDC437	UniProt:A0A0R0LGI9	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:48824433..48827075

Molecular Weight (calculated)

32261.0 Da

IEP (calculated)

4.693

GRAVY (calculated)

-0.430

Length

290 amino acids

Sequence
(BLAST)

001: MNLKAFTKGN MQDLGYSSIY IKRSGQKRDG CGLFYKHDCA ELVLEEKIEY NDLVKSVPDG NSSNDDEHAN IQTVQSDKQK DVAPKNESKS NSEDRGDLND
101: PRVRLKRDCV GIMAAFKLKD RSHHIVIVAN TYLLAMKDPD WADVKLAQAK YLLSRIAKFK TLISDRYECI PEVILAGDFN STPGDMVYQY LVSGNPSSNL
201: TPDCLEESPS PIPLCSVYAS TRGEPPFTNY TPGFTGTLDY ILFSPSDNIK PISFLELLDS DPADIVGGLP NFSYPSDHLP IGAEFEIIKE

Best Arabidopsis Sequence Match ( AT1G31500.1 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPSS RVCRKVISRR MSTNPAIEPK VRKFESVEGV DIGSRNKSDG IRFRLVSYNI LAQVYVKSAL LPHSPPACLK WKARSHAILS
101: VLKNLQADFF CLQEVDEYDS FYRNNMDSLG YSGIYIQRTG QRKRDGCAIF YKPSCAELVT KERIEYNDLV DSIKADSVSC SEQKIETSNE GKDSRKDSRD
201: LNDPLVRLKR DCVGIMAAFR INKPFQHIVI VANTHLYWDP ELADVKLAQA KYLLSRLAQF KTLISDEFEC TPSLLLAGDF NSIPGDMVYS YLVSGNAKPT
301: ETIEEEEAPV PLSSVYEVTR GEPKFTNCTP GFTNTLDYIF ISPSDFIKPV SILQLPEPDS PDVVGFLPNH HHPSDHLPIG AEFEIRRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.