CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41616	Soybean	cytosol	71.49	84.74
VIT_17s0000g04030.t01	Wine grape	plastid	61.38	60.54
Solyc03g119710.2.1	Tomato	plastid	56.09	56.22
CDX92241	Canola	mitochondrion, nucleus, plastid	53.79	52.0
GSMUA_Achr7P12580_001	Banana	mitochondrion	37.93	51.24
CDY24484	Canola	mitochondrion	52.18	50.44
AT3G18500.3	Thale cress	nucleus	51.95	50.33
Bra022326.1-P	Field mustard	mitochondrion, plastid	51.72	48.81
KRH48475	Soybean	cytosol	31.72	48.08
KRH39200	Soybean	nucleus, plastid	42.07	42.76
Zm00001d045673_P003	Maize	plastid	43.22	42.44
TraesCS7A01G206900.2	Wheat	plastid	42.3	41.16
TraesCS7D01G209700.2	Wheat	plastid	42.07	40.94
EER89572	Sorghum	plastid	43.91	40.81
TraesCS7B01G114200.1	Wheat	plastid	41.84	40.81
Os06t0264900-00	Rice	plastid	28.51	40.52
HORVU0Hr1G020140.2	Barley	mitochondrion, nucleus	41.61	39.35
HORVU7Hr1G042150.3	Barley	nucleus, plastid	42.99	38.16
KRH71803	Soybean	cytosol	11.26	26.63
KRH76418	Soybean	nucleus	15.86	23.79
KRH39729	Soybean	plastid	20.92	23.27
KRH16019	Soybean	plastid	37.47	19.13
KRH38033	Soybean	cytosol	25.52	18.5
KRH68083	Soybean	cytosol	25.52	18.44
KRG96349	Soybean	cytosol	25.29	18.33
KRH71804	Soybean	cytosol	12.64	14.36
KRH05096	Soybean	cytosol	16.78	14.31

Protein Annotations

EMBL:ACUP02003358	EnsemblPlants:KRH60320	EnsemblPlantsGene:GLYMA_05G232800	EntrezGene:100779393	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	ProteinID:KRH60320
ProteinID:KRH60320.1	SUPFAM:SSF56219	UniParc:UPI00023393CA	UniProt:I1K5T1	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr5:-:41022974..41029983

Molecular Weight (calculated)

48692.7 Da

IEP (calculated)

7.444

GRAVY (calculated)

-0.298

Length

435 amino acids

Sequence
(BLAST)

001: MACNSFSWLM LSSNNAKRVP LFFVPTSTCF KFDVPVASQI QWHTRSRNIP QIKRHWVEAS DQSLASQERF SVASYNILGD RNASQHSDLY VNVPSRYINW
101: GRRKRVICDE LFGWDPDIIC LQEVDKYFEL SDIMVKAGYA GSYKRRTGDA ADGCAMFWKA DKFRLLEGES IQFKDIGLRD NVAQLSVFEM CESDSRRMLV
201: GNIHVLYNPN RGEVKLGQIR FLSSRAQYLS EKWGNTPVVL AGDFNSTPQS GIYKFLSSSE LNIMLYDRKE LSGQKRCRPA QVLGENKETV GPIVALDGLF
301: KCWTDEEVKL ATGDSERHLA VHPLKLNSSY ATINGSTSTR GFNGEPLATS YHSKFLGTVD YLWYSDGIVP TRVLDTVSIS DLLRAGGLPC KKVGSDHLAL
401: VSEFSFSVTN NEPTDIVAAA ASPIVDIGEP NNQRS

Best Arabidopsis Sequence Match ( AT3G18500.4 )
(BLAST)

001: MRCVNRVDCS WSRPSEAYRI LPSGGHLSSG FHQCPLSSLS FRSSFVCCSS STSGPSDSNP ESSSNRSYSR RWQNPLPRRQ HPDQIPSSQI ARDWIDSDTT
101: PVSQALERFT VVSYNILGDG NSSYHRELYS NVSVPYLKWG YRKRLICEEL IRLNPDIISM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAMFWKAD
201: RFGVLERENI EFSQFGMRDN VAQLAVLELR KSNKSRKILL GNIHVLYNPN QGDVKLGQVR SLCSKAHLLS KKWGDIPIVL CGDFNSTPKS PLYNFLASSE
301: LNVMEHDKKE LSGQKNCRPT KVLETGSKSS NTITFSSWTK EEIRVATGQE NSYWAAHPLK LNSSYASVKG SANTRDSVGE PLATSYHSKF LGTVDYLWYS
401: DGLLPARVLD TLPIDVLCKT KGLPCQELGS DHLALVSEFV FEPDG

Arabidopsis Description

DNAse I-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8R6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.