CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60320	Soybean	plastid	84.74	71.49
VIT_17s0000g04030.t01	Wine grape	plastid	56.95	47.39
Solyc03g119710.2.1	Tomato	plastid	54.22	45.85
KRH48475	Soybean	cytosol	34.33	43.9
GSMUA_Achr7P12580_001	Banana	mitochondrion	37.87	43.17
CDX92241	Canola	mitochondrion, nucleus, plastid	52.86	43.11
AT3G18500.3	Thale cress	nucleus	51.77	42.32
CDY24484	Canola	mitochondrion	51.77	42.22
Bra022326.1-P	Field mustard	mitochondrion, plastid	50.41	40.13
KRH39200	Soybean	nucleus, plastid	42.23	36.22
Zm00001d045673_P003	Maize	plastid	42.51	35.21
Os06t0264900-00	Rice	plastid	28.61	34.31
TraesCS7A01G206900.2	Wheat	plastid	41.14	33.78
EER89572	Sorghum	plastid	43.05	33.76
TraesCS7B01G114200.1	Wheat	plastid	40.87	33.63
TraesCS7D01G209700.2	Wheat	plastid	40.87	33.56
HORVU0Hr1G020140.2	Barley	mitochondrion, nucleus	41.96	33.48
HORVU7Hr1G042150.3	Barley	nucleus, plastid	41.96	31.43
KRH71803	Soybean	cytosol	12.53	25.0
KRH39729	Soybean	plastid	22.62	21.23
KRH76418	Soybean	nucleus	16.35	20.69
KRH38033	Soybean	cytosol	26.98	16.5
KRG96349	Soybean	cytosol	26.7	16.33
KRH68083	Soybean	cytosol	26.7	16.28
KRH16019	Soybean	plastid	37.06	15.96
KRH71804	Soybean	cytosol	12.81	12.27
KRH05096	Soybean	cytosol	16.89	12.16

Protein Annotations

EMBL:ACUP02004772	EnsemblPlants:KRH41616	EnsemblPlantsGene:GLYMA_08G040200	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	ProteinID:KRH41616	ProteinID:KRH41616.1
SEG:seg	SUPFAM:SSF56219	UniParc:UPI00029691F1	UniProt:K7L4V1	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr8:-:3163783..3168600

Molecular Weight (calculated)

41280.0 Da

IEP (calculated)

9.023

GRAVY (calculated)

-0.344

Length

367 amino acids

Sequence
(BLAST)

001: RNIPQFKRHW VEASDQSLAS PYYYVPERFS VASYNILGGR NASQHSDLYV NVPSRYINWA HRKRIISDEL FGWDPDIICL QEVDKYFELS DIMVKAGYAG
101: SYKRRTGDKA DGCAMFWKAH NYWKERPFNI RTLAQLSVFE MCKSDSRRLL VGNIHVLYNP NRGEVKLGQI RFLLSRAQYL SEKWGNTPVV LAGDFNSTPQ
201: SGIYKFLSSS ELNVLLYYRK ELSGQKRCRP AQVLGENKQT VGPIVTLYGH HKLKLTGYMC GSNCTQGFNG ELLATSYHSK FLGTVDYLWY SDGIVPSRVL
301: DTVSISDLLR TGGLPCKKVG SDHLALVSEF SFSVTNNEPK DKVAAAAAAA AAASPIVDIE EPNNQQS

Best Arabidopsis Sequence Match ( AT3G18500.4 )
(BLAST)

001: MRCVNRVDCS WSRPSEAYRI LPSGGHLSSG FHQCPLSSLS FRSSFVCCSS STSGPSDSNP ESSSNRSYSR RWQNPLPRRQ HPDQIPSSQI ARDWIDSDTT
101: PVSQALERFT VVSYNILGDG NSSYHRELYS NVSVPYLKWG YRKRLICEEL IRLNPDIISM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAMFWKAD
201: RFGVLERENI EFSQFGMRDN VAQLAVLELR KSNKSRKILL GNIHVLYNPN QGDVKLGQVR SLCSKAHLLS KKWGDIPIVL CGDFNSTPKS PLYNFLASSE
301: LNVMEHDKKE LSGQKNCRPT KVLETGSKSS NTITFSSWTK EEIRVATGQE NSYWAAHPLK LNSSYASVKG SANTRDSVGE PLATSYHSKF LGTVDYLWYS
401: DGLLPARVLD TLPIDVLCKT KGLPCQELGS DHLALVSEFV FEPDG

Arabidopsis Description

DNAse I-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8R6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.