Factsheet for Os06t0264900-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G206900.2	Wheat	plastid	75.82	51.9
TraesCS7B01G114200.1	Wheat	plastid	74.84	51.35
Zm00001d045673_P003	Maize	plastid	74.18	51.24
TraesCS7D01G209700.2	Wheat	plastid	74.84	51.23
EER89572	Sorghum	plastid	76.47	50.0
HORVU7Hr1G042150.3	Barley	nucleus, plastid	76.14	47.55
HORVU0Hr1G020140.2	Barley	mitochondrion, nucleus	70.59	46.96
GSMUA_Achr7P12580_001	Banana	mitochondrion	36.93	35.09
VIT_17s0000g04030.t01	Wine grape	plastid	45.42	31.52
KRH41616	Soybean	cytosol	34.31	28.61
KRH60320	Soybean	plastid	40.52	28.51
Solyc03g119710.2.1	Tomato	plastid	39.54	27.88
CDX92241	Canola	mitochondrion, nucleus, plastid	39.22	26.67
CDY24484	Canola	mitochondrion	38.89	26.44
Bra022326.1-P	Field mustard	mitochondrion, plastid	39.22	26.03
AT3G18500.3	Thale cress	nucleus	37.25	25.39
Os05t0389500-02	Rice	mitochondrion	20.26	15.94
Os10t0412100-01	Rice	cytosol	26.14	13.22
Os03t0166800-01	Rice	cytosol	26.14	13.18
Os01t0610600-01	Rice	mitochondrion	35.29	11.96

Protein Annotations

EnsemblPlants:Os06t0264900-00	EnsemblPlantsGene:Os06g0264900	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691
PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	ProteinID:BAS97144.1	SUPFAM:SSF56219	UniParc:UPI0003939FF4
UniProt:A0A0P0WUW9	MapMan:35.1	:	:	:	:

Description

Endonuclease/exonuclease/phosphatase domain containing protein. (Os06t0264900-00)

Coordinates

chr6:-:8753354..8757513

Molecular Weight (calculated)

34845.3 Da

IEP (calculated)

9.674

GRAVY (calculated)

-0.593

Length

306 amino acids

Sequence
(BLAST)

001: MASAAPRSRL TPPTPAMHPH RKRARSPPAS GSLVRCSSSG NGAPRDHRRR WQSPAAGSPG RVYQRHRAQQ YGVPSRRWVL AEEASTSDGD ACTIMSYNIL
101: ADNNAHYHPD LYLDVPWDAM RWDSRRRLII REIRHWDPDL VCLQEVDRFR DIATEMENRG YQSRFKGRTG DAKDGCATFW KSKGLHLLEE DSIDFSEYNL
201: RNNVAQIFVF ELNRAQKLVV GNIHVLFNPK RGDVKLGQIR MLLEKANALA EKWGGIPIVL AGDFNSTPDS AIYKFLSTMK LDISLHDRRQ LSGLDSSEFA
301: LYDLFH

Best Arabidopsis Sequence Match ( AT1G73875.2 )
(BLAST)

001: MSGYERKNTT ANSITITKRK RNSISEQSEN VYEKSNRKES ITLKPHRSFT PGFSQRDCKP VRHSKSSLRR RRRTKEKISS SVEREWVFSA NNFENLADKL
101: VLVSYNLLGV DNASNHMDLY YNVPRKHLEW SRRKHLICKE ISRYNASILC LQEVDRFDDL DVLLKNRGFR GVHKSRTGEA SDGCAIFWKE NLFELLDHQH
201: IEFDKFGMRN NVAQLCVLEM NCEEDPKSKL RVRSSDPRRL VVGNIHVLFN PKRGDIKLGQ VRLFLEKAYK LSQEWGNIPV AIAGDLNSTP QSAIYDFIAS
301: ADLDTQLHDR RQISGQTEVE PKERSFRNHY AFSASASISG SLLNEWSQEE LQLATGGQET THVQHQLKLN SAYSGVPVSV FVSCSRLVDA SKRVEICLTG
401: KLSS

Arabidopsis Description

CCR4-5Carbon catabolite repressor protein 4 homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WKY2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.