Factsheet for GSMUA_Achr7P12580_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G206900.2	Wheat	plastid	53.73	38.7
TraesCS7B01G114200.1	Wheat	plastid	53.42	38.56
TraesCS7D01G209700.2	Wheat	plastid	53.11	38.26
VIT_17s0000g04030.t01	Wine grape	plastid	52.17	38.1
KRH60320	Soybean	plastid	51.24	37.93
KRH41616	Soybean	cytosol	43.17	37.87
HORVU0Hr1G020140.2	Barley	mitochondrion, nucleus	53.42	37.39
Os06t0264900-00	Rice	plastid	35.09	36.93
Solyc03g119710.2.1	Tomato	plastid	49.38	36.64
Zm00001d045673_P003	Maize	plastid	50.31	36.57
AT3G18500.3	Thale cress	nucleus	49.69	35.63
EER89572	Sorghum	plastid	51.24	35.26
HORVU7Hr1G042150.3	Barley	nucleus, plastid	53.42	35.1
CDX92241	Canola	mitochondrion, nucleus, plastid	48.76	34.89
CDY24484	Canola	mitochondrion	47.83	34.22
Bra022326.1-P	Field mustard	mitochondrion, plastid	46.58	32.54
GSMUA_Achr6P09650_001	Banana	nucleus	44.72	30.51
GSMUA_AchrUn_...	Banana	cytosol	24.22	24.61
GSMUA_Achr9P25420_001	Banana	cytosol	28.26	15.61
GSMUA_Achr9P11040_001	Banana	cytosol, peroxisome, vacuole	27.64	15.42
GSMUA_Achr1P14560_001	Banana	nucleus	36.02	15.05
GSMUA_Achr4P17200_001	Banana	cytosol	27.02	14.9
GSMUA_Achr6P29710_001	Banana	endoplasmic reticulum, golgi	25.16	11.1

Protein Annotations

EnsemblPlants:GSMUA_Achr7P12580_001	EnsemblPlants:GSMUA_Achr7T12580_001	EnsemblPlantsGene:GSMUA_Achr7G12580_001	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	SEG:seg	SUPFAM:SSF56219
UniParc:UPI000296CF94	UniProt:M0TGZ6	MapMan:35.1	:	:	:

Description

Carbon catabolite repressor protein 4 homolog 3 [Source:GMGC_GENE;Acc:GSMUA_Achr7G12580_001]

Coordinates

chr7:-:10079888..10085961

Molecular Weight (calculated)

36407.7 Da

IEP (calculated)

8.782

GRAVY (calculated)

-0.352

Length

322 amino acids

Sequence
(BLAST)

001: MNWSSRKRLI CHEIRRWNAD LLCLQAIDRY EDISICIRGK GYVGGYKGRT GGAKDGCALF WKKERFKLLE VDNIEFRSFG LHNNVAQLFV LEKQMMRNKD
101: ESWNMQLSED DQRRVVVGNI HVLFNPKRGD VKFGQVHRLL LKANALSEKW GGIPVVLAGD FNSTPESAIY EFLSTSKLNI ALHGRKKVFR QDKCQFVLDD
201: LPCLINDWTG ENLTRAIVNS HDSLITHPLQ LKSSYASVQR NASTRNSQGE PLATSCHSKF LGTVDYIWYS TGLACTRVLD TLPLDTLRKL GGLPCKDIGS
301: DHLALVAEFK FTGGNELQQD GN

Best Arabidopsis Sequence Match ( AT3G18500.4 )
(BLAST)

001: MRCVNRVDCS WSRPSEAYRI LPSGGHLSSG FHQCPLSSLS FRSSFVCCSS STSGPSDSNP ESSSNRSYSR RWQNPLPRRQ HPDQIPSSQI ARDWIDSDTT
101: PVSQALERFT VVSYNILGDG NSSYHRELYS NVSVPYLKWG YRKRLICEEL IRLNPDIISM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAMFWKAD
201: RFGVLERENI EFSQFGMRDN VAQLAVLELR KSNKSRKILL GNIHVLYNPN QGDVKLGQVR SLCSKAHLLS KKWGDIPIVL CGDFNSTPKS PLYNFLASSE
301: LNVMEHDKKE LSGQKNCRPT KVLETGSKSS NTITFSSWTK EEIRVATGQE NSYWAAHPLK LNSSYASVKG SANTRDSVGE PLATSYHSKF LGTVDYLWYS
401: DGLLPARVLD TLPIDVLCKT KGLPCQELGS DHLALVSEFV FEPDG

Arabidopsis Description

DNAse I-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8R6]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.