Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- nucleus 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX92241 | Canola | mitochondrion, nucleus, plastid | 93.78 | 93.78 |
Bra022326.1-P | Field mustard | mitochondrion, plastid | 91.33 | 89.15 |
AT3G18500.3 | Thale cress | nucleus | 79.78 | 79.96 |
VIT_17s0000g04030.t01 | Wine grape | plastid | 56.0 | 57.14 |
Solyc03g119710.2.1 | Tomato | plastid | 52.22 | 54.15 |
KRH60320 | Soybean | plastid | 50.44 | 52.18 |
KRH41616 | Soybean | cytosol | 42.22 | 51.77 |
GSMUA_Achr7P12580_001 | Banana | mitochondrion | 34.22 | 47.83 |
Zm00001d045673_P003 | Maize | plastid | 42.0 | 42.66 |
TraesCS7B01G114200.1 | Wheat | plastid | 40.67 | 41.03 |
TraesCS7A01G206900.2 | Wheat | plastid | 40.67 | 40.94 |
EER89572 | Sorghum | plastid | 42.44 | 40.81 |
TraesCS7D01G209700.2 | Wheat | plastid | 40.44 | 40.72 |
CDX96494 | Canola | plastid | 39.33 | 40.14 |
HORVU0Hr1G020140.2 | Barley | mitochondrion, nucleus | 40.22 | 39.35 |
Os06t0264900-00 | Rice | plastid | 26.44 | 38.89 |
CDX73024 | Canola | plastid | 39.11 | 38.77 |
HORVU7Hr1G042150.3 | Barley | nucleus, plastid | 41.11 | 37.76 |
CDY27147 | Canola | plastid | 20.44 | 23.83 |
CDY12415 | Canola | plastid | 19.56 | 23.66 |
CDY12304 | Canola | plastid | 20.67 | 23.25 |
CDX97099 | Canola | plastid | 38.44 | 23.01 |
CDX69764 | Canola | mitochondrion, plastid | 38.44 | 22.88 |
CDY62302 | Canola | mitochondrion, plastid | 20.44 | 21.4 |
CDX88992 | Canola | mitochondrion | 24.89 | 20.22 |
CDY00572 | Canola | cytosol | 25.33 | 19.0 |
CDX67753 | Canola | cytosol | 25.33 | 19.0 |
CDX71943 | Canola | cytosol | 24.89 | 18.6 |
CDX98303 | Canola | cytosol | 24.44 | 18.58 |
CDX67751 | Canola | cytosol | 24.44 | 18.58 |
CDY49233 | Canola | cytosol | 24.67 | 18.5 |
CDX98305 | Canola | plastid | 24.89 | 17.58 |
CDX97100 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:CDY24484 | EnsemblPlantsGene:GSBRNA2T00026767001 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | InterPro:IPR036691 | PANTHER:PTHR12121 |
PANTHER:PTHR12121:SF51 | PFAM:PF03372 | ProteinID:CDY24484 | ProteinID:CDY24484.1 | SEG:seg | SUPFAM:SSF56219 |
UniParc:UPI0004EEB72C | UniProt:A0A078GGM4 | MapMan:35.1 | : | : | : |
Description
BnaC05g34700DBnaC05g34700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGM4]
Coordinates
chrLK032159:+:476097..479465
Molecular Weight (calculated)
50844.0 Da
IEP (calculated)
9.007
GRAVY (calculated)
-0.487
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCVACSWSR PTGASRISFG GHLSSGFHRS HLSSSSLSFP SSGDASFLVS CSSASESSDH KDSSNRSYSR RWYNPLPRRR HADQMPTSRI PRDWIDSDTS
101: TVSEDSDRFT VVSYNILGDR NSSYHKDLYS NVSFPYLKWG YRKRLICEEL IRLRPDIICM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAIFWKAD
201: RFRVLERENI EFSQFGMRDN VAQLSVLELR KSMSRKILVG NIHVLYNPSR GDVKLGQIRS LCTKAHLLSK KWGDIPIVLG GDYNSLPQSP LYNFLASSEL
301: NIMKQDKREL SGQRNRLPNQ VLEAGGKPSN PITSINRCLS SSWSNEEIRL ATGQESSYWA VHPLKLHSSY ASVKGSKNTR DSVGEPLATS YHSKFLGTVD
401: YLWYSDGVAP VRVLDTLPID VLCRTRGLPC QELGSDHLAL VSEFFFEPNG
101: TVSEDSDRFT VVSYNILGDR NSSYHKDLYS NVSFPYLKWG YRKRLICEEL IRLRPDIICM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAIFWKAD
201: RFRVLERENI EFSQFGMRDN VAQLSVLELR KSMSRKILVG NIHVLYNPSR GDVKLGQIRS LCTKAHLLSK KWGDIPIVLG GDYNSLPQSP LYNFLASSEL
301: NIMKQDKREL SGQRNRLPNQ VLEAGGKPSN PITSINRCLS SSWSNEEIRL ATGQESSYWA VHPLKLHSSY ASVKGSKNTR DSVGEPLATS YHSKFLGTVD
401: YLWYSDGVAP VRVLDTLPID VLCRTRGLPC QELGSDHLAL VSEFFFEPNG
001: MRCVNRVDCS WSRPSEAYRI LPSGGHLSSG FHQCPLSSLS FRSSFVCCSS STSGPSDSNP ESSSNRSYSR RWQNPLPRRQ HPDQIPSSQI ARDWIDSDTT
101: PVSQALERFT VVSYNILGDG NSSYHRELYS NVSVPYLKWG YRKRLICEEL IRLNPDIISM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAMFWKAD
201: RFGVLERENI EFSQFGMRDN VAQLAVLELR KSNKSRKILL GNIHVLYNPN QGDVKLGQVR SLCSKAHLLS KKWGDIPIVL CGDFNSTPKS PLYNFLASSE
301: LNVMEHDKKE LSGQKNCRPT KVLETGSKSS NTITFRSFCS SWTKEEIRVA TGQENSYWAA HPLKLNSSYA SVKGSANTRD SVGEPLATSY HSKFLGTVDY
401: LWYSDGLLPA RVLDTLPIDV LCKTKGLPCQ ELGSDHLALV SEFVFEPDG
101: PVSQALERFT VVSYNILGDG NSSYHRELYS NVSVPYLKWG YRKRLICEEL IRLNPDIISM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAMFWKAD
201: RFGVLERENI EFSQFGMRDN VAQLAVLELR KSNKSRKILL GNIHVLYNPN QGDVKLGQVR SLCSKAHLLS KKWGDIPIVL CGDFNSTPKS PLYNFLASSE
301: LNVMEHDKKE LSGQKNCRPT KVLETGSKSS NTITFRSFCS SWTKEEIRVA TGQENSYWAA HPLKLNSSYA SVKGSANTRD SVGEPLATSY HSKFLGTVDY
401: LWYSDGLLPA RVLDTLPIDV LCKTKGLPCQ ELGSDHLALV SEFVFEPDG
Arabidopsis Description
DNAse I-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8R6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.