CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69764	Canola	mitochondrion, plastid	93.09	92.59
AT5G11350.4	Thale cress	nucleus	77.26	76.95
VIT_04s0008g04720.t01	Wine grape	mitochondrion	44.02	42.11
KRH16019	Soybean	plastid	46.94	41.43
CDX92241	Canola	mitochondrion, nucleus, plastid	23.01	38.44
CDY24484	Canola	mitochondrion	23.01	38.44
CDX96494	Canola	plastid	22.21	37.87
Solyc08g067420.2.1	Tomato	plastid	43.35	37.34
CDX73024	Canola	plastid	22.21	36.78
GSMUA_Achr1P14560_001	Banana	nucleus	34.04	33.2
Zm00001d044447_P007	Maize	mitochondrion	23.8	31.29
KRH05096	Soybean	cytosol	20.61	30.39
EES03263	Sorghum	mitochondrion	34.18	29.47
TraesCS3B01G248600.1	Wheat	mitochondrion	35.24	28.93
Os01t0610600-01	Rice	mitochondrion	34.71	28.9
TraesCS3D01G233900.2	Wheat	mitochondrion	35.11	28.82
TraesCS3A01G218500.4	Wheat	mitochondrion	34.71	28.62
CDY12415	Canola	plastid	11.57	23.39
CDY12304	Canola	plastid	12.23	23.0
CDY27147	Canola	plastid	11.7	22.8
CDY62302	Canola	mitochondrion, plastid	12.1	21.16
CDX67751	Canola	cytosol	16.62	21.11
CDX98303	Canola	cytosol	16.49	20.95
CDX88992	Canola	mitochondrion	15.43	20.94
CDX67753	Canola	cytosol	16.36	20.5
CDY00572	Canola	cytosol	16.09	20.17
CDX71943	Canola	cytosol	16.09	20.1
CDY49233	Canola	cytosol	15.96	20.0
CDX98305	Canola	plastid	16.22	19.15
CDX97100	Canola	plastid	0.53	0.58

Protein Annotations

EnsemblPlants:CDX97099	EnsemblPlantsGene:GSBRNA2T00104081001	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691
PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	ProteinID:CDX97099	ProteinID:CDX97099.1	SEG:seg
SUPFAM:SSF56219	UniParc:UPI0004EEFA9F	MapMan:35.1	:	:	:

Description

BnaC09g45260D

Coordinates

chrLK031897:+:628741..632658

Molecular Weight (calculated)

83579.2 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.680

Length

752 amino acids

Sequence
(BLAST)

001: MRRSRSVAQV FSDAAISNAT TTCAPFVAMS SRPLYRGGRA RGRGRGRGGR SFSDRPYNDA GGHQFVTGDS HFQSVHDANL EFRHGNRGGS SSSSLDPRRF
101: NHAQQPPFNQ NYQLRPPPPQ VQWRPNHPPS GQSYSACPPP PFYQNQMSRP PPQRSFRQRP RSKPSDFREW EYAKTAPSPG SEKFVVLSYN ILADYLANDH
201: WRNLYFHIPR NVLSWGWRKN KIVFELGLWS ADIMCLQEVD KFQDLEEELK HRGYSGIWKM RTGNAVDGCA IFWRSNRFKL VQEESIQFNQ LGLRDNVAQI
301: CVLEALLNSH TKENEASPSE SCSRRVVVCN IHVLYNPKRG DFKLGQVRTL LERAHAVSKL WDDAPVVLCG DFNCTPKSHL YNFISEGKLD LSGVARNKVS
401: GQESAEIRPP RPEIYTRFQS DNKSPQGQAQ PQDLTANARM ENNSYMDVGI SPSIRNTSEL PCGETVLAGH KATSSSVRVL PGEDLASGCN LGGQNRQPDD
501: AGDLSLAEGL SSVTLSDPEP PQSFNAKDDS REKLSASSVI SETEHFPEEI GFNTQNDSSS LSTKVDTSAE MKLDDLTLDE AAVLAQEEEG IGEDGETFLA
601: KLHDNNEDLS KTGELVNDIS RESGSEAMHY GKVTYNPASW TPMEIAAATG DPGRSTVEHA LELKSTYSEI EGKANTRDEN GEPVVTSYHR CFMGTVDYIW
701: RSEGLQTVRV LAPIPKQAMQ WTPGFPTPKW GSDHIALVSE LAFCSIKSGP KS

Best Arabidopsis Sequence Match ( AT5G11350.1 )
(BLAST)

001: MRRSRFVAQV FSDVTFADAS TISAPIFTMS TRAPYRGARG RGRGRGGRSF SDRPYNDDAG RDQFVTGDSH FQSVHDANFR FRHGEPYRQH QPPLDQRQQP
101: PFNQNYEFRP PPPSRGQWQQ FRQPNQFPSN QNYAACPPPP FYQNQMSRPP PQQSFRQRPR SKPSDYREWE YAKTPPSPGS EKFVVLSYNI LADYLANDHW
201: RSLYFHIPRN MLSWGWRKSK LVFELSLWSA DIMCLQEVDK FQDLEEEMKH RGYSAIWKMR TGNAVDGCAI FWRSNRFKLV HEESIQFNQL GLRDNVAQIC
301: VLETLLTSHT KENETPPPES SAGSHRVVIC NIHVLFNPKR GDFKLGQVRT LLDKAHAVSK LWDDAPIVLC GDFNCTPKSP LYNFISDRKL DLSGLARDKV
401: SGQVSAEFRP PRPENYTTRY QSANKSPQGQ VQPPNLITNA HMENNSNIDV GTAPSEKTSE LPCGDTILAG HEATSSSDQV LPCENMASDC QFGIENRKPD
501: DSGNLSTAED LSSLTISDTE PQHASSARED LNTDRSVSSG LSETEQTPEE ICSSDQDISS SLSTKVDTFV AEMKLDGLKL DEPVVFAQDE ESLGEDGETF
601: LAKLHDNNEN LSQKGELVSE VPLKWSSEAL NSDKITYSPS SWTPMEIATA TGDPERTTVE HALELKSTYS EVEGQANTRD ENGEPVVTSY HRCFMGTVDY
701: IWRSEGLQTV RVLAPIPKQA MQWTPGFPTP KWGSDHIALV SELAFCSSKT LPKS

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT5G11350]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.