CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05096	Soybean	cytosol	47.89	80.0
VIT_04s0008g04720.t01	Wine grape	mitochondrion	45.89	49.75
CDX97099	Canola	plastid	41.43	46.94
Bra008968.1-P	Field mustard	mitochondrion, plastid	41.55	46.76
CDX69764	Canola	mitochondrion, plastid	41.2	46.43
AT5G11350.4	Thale cress	nucleus	40.85	46.09
KRH48475	Soybean	cytosol	14.67	43.55
Solyc08g067420.2.1	Tomato	plastid	42.49	41.47
GSMUA_Achr1P14560_001	Banana	nucleus	34.39	38.0
KRH39200	Soybean	nucleus, plastid	19.01	37.85
KRH60320	Soybean	plastid	19.13	37.47
KRH41616	Soybean	cytosol	15.96	37.06
Zm00001d044447_P007	Maize	mitochondrion	23.83	35.49
EES03263	Sorghum	mitochondrion	35.56	34.75
Os01t0610600-01	Rice	mitochondrion	36.03	34.0
TraesCS3B01G248600.1	Wheat	mitochondrion	34.62	32.21
TraesCS3D01G233900.2	Wheat	mitochondrion	34.27	31.88
TraesCS3A01G218500.4	Wheat	mitochondrion	34.04	31.8
KRH71803	Soybean	cytosol	5.99	27.72
KRH39729	Soybean	plastid	10.68	23.27
KRH76418	Soybean	nucleus	7.28	21.38
KRH38033	Soybean	cytosol	13.73	19.5
KRG96349	Soybean	cytosol	13.73	19.5
KRH68083	Soybean	cytosol	13.73	19.44
KRH71804	Soybean	cytosol	6.46	14.36
CDX97100	Canola	plastid	0.35	0.43

Protein Annotations

EMBL:ACUP02008754	EnsemblPlants:KRH16019	EnsemblPlantsGene:GLYMA_14G126800	EntrezGene:100810446	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf
InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	ProteinID:KRH16019
ProteinID:KRH16019.1	SEG:seg	SUPFAM:SSF56219	UniParc:UPI000233BE39	UniProt:I1M9L4	MapMan:35.1

Description

hypothetical protein

Coordinates

chr14:-:20289335..20297284

Molecular Weight (calculated)

95772.5 Da

IEP (calculated)

5.719

GRAVY (calculated)

-0.694

Length

852 amino acids

Sequence
(BLAST)

001: MRRTPPTIHF IAATDTAAAT ATSMSSRPLH RGRGRGFSGR PYSGDAHLRS VRDANLGLRR GEGGSFLNQT PHHQNPPYNP RPHPPPPPHH HRPQFRPYPP
101: QFRPPPPQFR PHPMQFRPPP PSDHRPAFRP PQHLRPRPPD YRDWELAWTP PPPPHCERFK VLSYNILADY LALDHRTKLY FHIPRHILDW QWRKRSIIFE
201: LGLWSADILC LQEVDRFHEL EEELKPKGYS GIWKMRTGNP VDGCAIFWRN SRFKLLYEEC IEFNKLGLRD NVAQLCVLEF INQNGSLPSS LTGSSKVVVC
301: NIHVLYNPNR GEIKLGQVRV LLDKAKAVSK LWNDAPVAIC GDFNCTPKSP LYNFISEQKL DLSGIDRNKV SGQASATIHA SKLYYGPNSS EISANGSVQA
401: TSTEGDKEDI EQNNSRLDTR DLDTKCHSLD NQHTQTVSDM SVNSCTNVDC GKESDAYAGK DTQETSVDHS KVSCEVGSIK EPNPSYSEGR IHIDHVNGDI
501: HDITPVTFSA PEEVHSDATW LGSNEHIPNA VPTSNKELLI EESNLHVPEG NKHVEFDCAP TSLQEDDQSS KMRIDLESID LDNIEISSTK PSSQTSVSCV
601: FEDEDSPSHE EIDNDQNNSS STSYLVDKLH HLSNITFPPD MKEKSFFDEM DKTIIGGESE DGSRFVSSLH NAGEVAFDLG SSMKSDLEKP YQSEELDSAS
701: NNLLLPVESI EMEDYLSPRQ ISESINSEQA TYTPALWTPM EIETATGNAD CTFLEHPLQL RSTYTEAMDC SGTRDPHGEP LVTSYNRRFL GTVDYIWRSE
801: GLQTTRVLAP ISKHAMQWTP GFPTKKWGSD HIALVTELAF LKDSTDTSND VK

Best Arabidopsis Sequence Match ( AT5G11350.3 )
(BLAST)

001: MRRSRFVAQV FSDVTFADAS TISAPIFTMS TRAPYRGARG RGRGRGGRSF SDRPYNDDAG RDQFVTGDSH FQSVHDANFR FRHGEPYRQH QPPLDQRQQP
101: PFNQNYEFRP PPPSRGQWQQ FRQPNQFPSN QNYAACPPPP FYQNQMSRPP PQQSFRQRPR SKPSDYREWE YAKTPPSPGS EKFVVLSYNI LADYLANDHW
201: RSLYFHIPRN MLSWGWRKSK LVFELSLWSA DIMCLQEVDK FQDLEEEMKH RGYSAIWKMR TGNAVDGCAI FWRSNRFKLV HEESIQFNQL GLRDNVAQIC
301: VLETLLTSHT KENETPPPES SAGSHRVVIC NIHVLFNPKR GDFKLGQVRT LLDKAHAVSK LWDDAPIVLC GDFNCTPKSP LYNFISDRKL DLSGLARDKV
401: SGQVSAEFRP PRPENYTTRY QSANKSPQGQ VQPPNLITNA HMENNSNIDV GTAPSEKTSE LPCGDTILAG HEATSSSDQV LPCENMASDC QFGIENRKPD
501: DSGNLSTAED LSSLTISDTE PQHASSARED LNTDRSVSSG LSETEQTPEE ICSSDQDISS SLSTKVDTFV AEMKLDGLKL DEPVVFAQDE ESLGEDGETF
601: LAKLHDNNEN LSQKGELVSE VPLKWSSEAL NSDKITYSPS SWTPMEIATA TGDPERTTVE HALELKSTYS EVEGQANTRD ENGEPVVTSY HRCFMGTVDY
701: IWY

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT5G11350]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.