CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76418	Soybean	nucleus	65.98	88.97
VIT_02s0087g00390.t01	Wine grape	mitochondrion	68.54	68.19
PGSC0003DMT400040652	Potato	cytosol, plastid	60.1	64.56
Bra023195.1-P	Field mustard	nucleus	58.06	62.53
Bra038426.1-P	Field mustard	plastid	59.85	60.94
CDY27147	Canola	plastid	59.85	60.62
CDY12415	Canola	plastid	57.54	60.48
Solyc08g075010.2.1	Tomato	mitochondrion	59.59	59.9
CDY12304	Canola	plastid	59.34	58.0
GSMUA_AchrUn_...	Banana	cytosol	45.27	55.84
CDY62302	Canola	mitochondrion, plastid	59.34	53.95
EES19469	Sorghum	plastid	52.94	52.67
Os05t0389500-02	Rice	mitochondrion	50.38	50.64
Zm00001d038091_P006	Maize	plastid	53.2	50.61
TraesCS1A01G243100.1	Wheat	mitochondrion	51.15	50.51
TraesCS1B01G254600.1	Wheat	mitochondrion	50.9	50.25
TraesCS1D01G243100.1	Wheat	mitochondrion	50.9	50.25
AT1G31530.1	Thale cress	cytosol	31.2	43.11
KRH71803	Soybean	cytosol	14.32	30.43
KRH48475	Soybean	cytosol	19.44	26.48
KRH41616	Soybean	cytosol	21.23	22.62
KRH39200	Soybean	nucleus, plastid	24.04	21.96
KRH60320	Soybean	plastid	23.27	20.92
KRH38033	Soybean	cytosol	26.6	17.33
KRH68083	Soybean	cytosol	26.09	16.94
KRG96349	Soybean	cytosol	25.58	16.67
KRH71804	Soybean	cytosol	11.0	11.23
KRH16019	Soybean	plastid	23.27	10.68
KRH05096	Soybean	cytosol	12.02	9.22

Protein Annotations

EMBL:ACUP02005958	EnsemblPlants:KRH39729	EnsemblPlantsGene:GLYMA_09G216700	EntrezGene:100775932	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF42	PFAM:PF03372	ProteinID:KRH39729	ProteinID:KRH39729.1
SEG:seg	SUPFAM:SSF56219	UniParc:UPI0003DE8354	UniProt:A0A0R0IBI3	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr9:-:43981434..43985248

Molecular Weight (calculated)

43630.7 Da

IEP (calculated)

5.853

GRAVY (calculated)

-0.318

Length

391 amino acids

Sequence
(BLAST)

001: MLKAVAACAV LCSNSSTSSA IRKMSSFSPA FPKFISVEGA DIHSRTKPDG FRFSLVSYNI LAQAYVKSSL FPHSPSPSLK WKLRSDTILA VLKNLGADFF
101: CLQEVDEFDS FYKGNMQDLG YSSIYMKRSG QKRDGCGLFY KHNRAELVLE EKIEYNDLVK SVPDGNSSNN DEHTNIQTVQ PDKQKDVPPK NGSKSNSKDR
201: GDPNDPCVRL KRDCVGIMAA FKLKDRSHHI VIVANTHLYW DPEWADVKLA QAKYLLSRLA KFKTLISDRY ECIPEVILAG DFNSMPGDMV YRYLVSGNPS
301: SNLMPDCLEE SPIPLCSVYA STRGEPPFTN YTPDFTGTLD YILFSPSDHI KPISFLELPD SDAADIVGGL PNFIYPSDHL PIGAEFEIIE E

Best Arabidopsis Sequence Match ( AT1G31500.1 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPSS RVCRKVISRR MSTNPAIEPK VRKFESVEGV DIGSRNKSDG IRFRLVSYNI LAQVYVKSAL LPHSPPACLK WKARSHAILS
101: VLKNLQADFF CLQEVDEYDS FYRNNMDSLG YSGIYIQRTG QRKRDGCAIF YKPSCAELVT KERIEYNDLV DSIKADSVSC SEQKIETSNE GKDSRKDSRD
201: LNDPLVRLKR DCVGIMAAFR INKPFQHIVI VANTHLYWDP ELADVKLAQA KYLLSRLAQF KTLISDEFEC TPSLLLAGDF NSIPGDMVYS YLVSGNAKPT
301: ETIEEEEAPV PLSSVYEVTR GEPKFTNCTP GFTNTLDYIF ISPSDFIKPV SILQLPEPDS PDVVGFLPNH HHPSDHLPIG AEFEIRRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.