CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038426.1-P	Field mustard	plastid	97.93	98.44
CDY12415	Canola	plastid	93.26	96.77
CDY12304	Canola	plastid	87.05	84.0
AT1G31500.7	Thale cress	mitochondrion	84.97	77.73
CDY62302	Canola	mitochondrion, plastid	85.75	76.98
VIT_02s0087g00390.t01	Wine grape	mitochondrion	64.51	63.36
PGSC0003DMT400040652	Potato	cytosol, plastid	56.74	60.16
KRH39729	Soybean	plastid	60.62	59.85
KRH76418	Soybean	nucleus	43.01	57.24
GSMUA_AchrUn_...	Banana	cytosol	46.11	56.15
Solyc08g075010.2.1	Tomato	mitochondrion	56.48	56.04
Os05t0389500-02	Rice	mitochondrion	52.59	52.19
EES19469	Sorghum	plastid	52.59	51.65
TraesCS1A01G243100.1	Wheat	mitochondrion	52.33	51.01
TraesCS1D01G243100.1	Wheat	mitochondrion	52.07	50.76
TraesCS1B01G254600.1	Wheat	mitochondrion	51.81	50.51
Zm00001d038091_P006	Maize	plastid	52.07	48.91
CDY24484	Canola	mitochondrion	23.83	20.44
CDX92241	Canola	mitochondrion, nucleus, plastid	23.83	20.44
CDX96494	Canola	plastid	22.54	19.73
CDX73024	Canola	plastid	22.54	19.16
CDX98303	Canola	cytosol	28.24	18.41
CDX67751	Canola	cytosol	27.72	18.07
CDX88992	Canola	mitochondrion	24.87	17.33
CDX67753	Canola	cytosol	25.91	16.67
CDY49233	Canola	cytosol	25.65	16.5
CDY00572	Canola	cytosol	25.65	16.5
CDX71943	Canola	cytosol	25.65	16.45
CDX98305	Canola	plastid	25.91	15.7
CDX69764	Canola	mitochondrion, plastid	23.06	11.77
CDX97099	Canola	plastid	22.8	11.7
CDX97100	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY27147	EnsemblPlantsGene:GSBRNA2T00036992001	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691
PANTHER:PTHR12121	PANTHER:PTHR12121:SF42	PFAM:PF03372	ProteinID:CDY27147	ProteinID:CDY27147.1	SEG:seg
SUPFAM:SSF56219	UniParc:UPI0004EE8D44	UniProt:A0A078GPM2	MapMan:35.1	:	:

Description

BnaA08g07850DBnaA08g07850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPM2]

Coordinates

chrLK032200:+:284207..286645

Molecular Weight (calculated)

43762.4 Da

IEP (calculated)

6.598

GRAVY (calculated)

-0.337

Length

386 amino acids

Sequence
(BLAST)

001: MFNNTLLLHL PLPRPSLPSF TSCRASRKIL SKRMTTAMDP KVGKFESVEG ADLNSISKPD GIRFRLVSYN ILAQVYVKSS FFPHSPPACL KWKARSHAIL
101: SVLKKLQADF FCLQEVDEYD SFYRKNMESL GYSGIYIQRT GQRKRDGCAI FYKPSCAELV TKERIEYNDL LDEQKIETSN EAKGDEKEAK DSQKDSRDLN
201: DPQVRLKRDC VGIMAAFRIN KPFHHMVIVA NTHLYWDPEL ADVKLAQAKY LLSRLAQFKT LISDEFECTP SLLLAGDFNS IPGDMVYSYL VSGYKKPAET
301: IAEEVAPIPM CSVYEVTRGE PKFTNCTPGF TNTLDYIFFS PSDFIKPVSI LQLPEPESPD VVGFLPNDHH PSDHLPIGAE FEISRE

Best Arabidopsis Sequence Match ( AT1G31500.1 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPSS RVCRKVISRR MSTNPAIEPK VRKFESVEGV DIGSRNKSDG IRFRLVSYNI LAQVYVKSAL LPHSPPACLK WKARSHAILS
101: VLKNLQADFF CLQEVDEYDS FYRNNMDSLG YSGIYIQRTG QRKRDGCAIF YKPSCAELVT KERIEYNDLV DSIKADSVSC SEQKIETSNE GKDSRKDSRD
201: LNDPLVRLKR DCVGIMAAFR INKPFQHIVI VANTHLYWDP ELADVKLAQA KYLLSRLAQF KTLISDEFEC TPSLLLAGDF NSIPGDMVYS YLVSGNAKPT
301: ETIEEEEAPV PLSSVYEVTR GEPKFTNCTP GFTNTLDYIF ISPSDFIKPV SILQLPEPDS PDVVGFLPNH HHPSDHLPIG AEFEIRRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.