CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97099	Canola	plastid	0.58	0.53
Solyc08g067420.2.1	Tomato	plastid	0.58	0.46
KRH16019	Soybean	plastid	0.43	0.35
AT5G11350.4	Thale cress	nucleus	0.29	0.26
CDY12304	Canola	plastid	0.14	0.25
CDX88992	Canola	mitochondrion	0.14	0.18
CDX67753	Canola	cytosol	0.14	0.17
CDY49233	Canola	cytosol	0.14	0.17
CDY00572	Canola	cytosol	0.14	0.17
CDX71943	Canola	cytosol	0.14	0.17
CDX98305	Canola	plastid	0.14	0.16
CDX69764	Canola	mitochondrion, plastid	0.14	0.13
VIT_04s0008g04720.t01	Wine grape	mitochondrion	0.14	0.13
TraesCS3A01G218500.4	Wheat	mitochondrion	0.0	0.0
KRH05096	Soybean	cytosol	0.0	0.0
Os01t0610600-01	Rice	mitochondrion	0.0	0.0
CDY24484	Canola	mitochondrion	0.0	0.0
TraesCS3B01G248600.1	Wheat	mitochondrion	0.0	0.0
TraesCS3D01G233900.2	Wheat	mitochondrion	0.0	0.0
Zm00001d044447_P007	Maize	mitochondrion	0.0	0.0
GSMUA_Achr1P14560_001	Banana	nucleus	0.0	0.0
EES03263	Sorghum	mitochondrion	0.0	0.0
CDY62302	Canola	mitochondrion, plastid	0.0	0.0
CDY27147	Canola	plastid	0.0	0.0
CDY12415	Canola	plastid	0.0	0.0
CDX98303	Canola	cytosol	0.0	0.0
CDX96494	Canola	plastid	0.0	0.0
CDX92241	Canola	mitochondrion, nucleus, plastid	0.0	0.0
CDX73024	Canola	plastid	0.0	0.0
CDX67751	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:9.1.2.2	GO:A0A078E4Z1
EnsemblPlants:CDX97100	ProteinID:CDX97100	ProteinID:CDX97100.1	InterPro:Dxylulose-5-P_synthase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008661	GO:GO:0009058	GO:GO:0009987
GO:GO:0016114	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00104082001	InterPro:IPR009014	PFAM:PF02779	PFAM:PF02780
PFAM:PF13292	PANTHER:PTHR43322	PANTHER:PTHR43322:SF3	MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-7560
SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_C	UniPathway:UPA00064	UniParc:UPI0004EE20DF	:	:	:

Description

BnaC09g45250D

Coordinates

chrLK031897:+:632900..636184

Molecular Weight (calculated)

75813.4 Da

IEP (calculated)

7.369

GRAVY (calculated)

-0.012

Length

695 amino acids

Sequence
(BLAST)

001: MGSASIGYQS GISARFDRNL NLRSDATLSS LPCKVDFSRK SFLSAATSTH NKECSNRARV CSLPNTDEKL ETPILDSIET PSQLKNLTVK ELKHLADEIR
101: TELLSVLWKT RKSVKPSLAA IELTLALHYV FRAPVDKILW DAVEQTYAHK VLTRRWSSIP SRQNNGVSGV TSRLESEYDS FGTGHGCNSI SAGLGLAVAR
201: DIKGKRDRVV AVIDSVTITA GQAYEAMSNA GYLDSNMIVI LNDNRHSLHP NMADGSKASI SALSSFMSKI QSSQIFRKFR ELAKAMTKKI GKGMYEWAAK
301: VDEYARGMVG PTGSTLFEEL GLYYIGPVDG HNIEDLVCVL REVASLDSMG PVLVHVITEE KRDAETGSII VKDRRTYSDC FVEALVMEAE KDRDIVVVHA
401: GIEMDPSLVT FQERFPERFF NVGLAEQHAV TFSAGLSSGG LKPFCIIPSA FLQRAYDQVV HDVDRQRKAV RFVITSAGLV GSDGPVQCGA FDIAFMSCLP
501: NMIAMAPANE DELVNMVATA ANVTDRPVCF RFPRGAIVNK NYLVPTGVPV EIGRGRVLLE GQKVALLGYG AMVQNCINAH SLLSKLGLNV TVADARFCKP
601: LDIKLVRDLC QNHKFLITVE EGCVGGFGSH VAQFIALDGQ LDGKIKWRPI VLPDGYIEEA SPNEQLALAG LTGHHIAATA LSLLGRTREA LLLMS

Best Arabidopsis Sequence Match ( AT5G11380.1 )
(BLAST)

001: MGSASIGYQF GISARFYGNF NLSSDITVSS LPCKLDVSIK SLFSAPSSTH KEYSNRARVC SLPNTDGYCD EKFETPILDS IETPLQLKNL SVKELKLLAD
101: EIRTELHSVL WKKTQKSMNP SFAAIELTLA LHYVFRAPVD NILWDAVEQT YAHKVLTRRW SAIPSRQNSG ISGVTSRLES EYDSFGTGHG CNSISAGLGL
201: AVARDMKGKR DRVVAVIDNV TITAGQAYEA MSNAGYLDSN MIVILNDSRH SLHPNMEEGS KASISALSSI MSKIQSSKVF RKFRELAKAM TKRIGKGMYE
301: WAAKVDEYAR GMVGPTGSTL FEELGLYYIG PVDGHNIEDL VCVLREVSSL DSMGPVLVHV ITEGNRDAET VKNIMVKDRR TYSDCFVEAL VMEAEKDRDI
401: VVVHAGMEMD PSLLTFQERF PDRFFNVGMA EQHAVTFSAG LSSGGLKPFC IIPSAFLQRA YDQVVHDVDR QRKAVRFVIT SAGLVGSDGP VQCGAFDIAF
501: MSSLPNMIAM APADEDELVN MVATAAYVTD RPVCFRFPRG SIVNMNYLVP TGLPIEIGRG RVLVEGQDVA LLGYGAMVQN CLHAHSLLSK LGLNVTVADA
601: RFCKPLDIKL VRDLCQNHKF LITVEEGCVG GFGSHVAQFI ALDGQLDGNI KWRPIVLPDG YIEEASPREQ LALAGLTGHH IAATALSLLG RTREALLLMS

Arabidopsis Description

DXPS31-D-deoxyxylulose 5-phosphate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LFL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.