Factsheet for GSMUA_Achr1P14560_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044447_P007	Maize	mitochondrion	28.27	38.11
GSMUA_Achr7P12580_001	Banana	mitochondrion	15.05	36.02
VIT_04s0008g04720.t01	Wine grape	mitochondrion	36.45	35.75
CDX69764	Canola	mitochondrion, plastid	33.85	34.52
KRH16019	Soybean	plastid	38.0	34.39
Bra008968.1-P	Field mustard	mitochondrion, plastid	33.72	34.35
AT5G11350.4	Thale cress	nucleus	33.59	34.3
EES03263	Sorghum	mitochondrion	38.52	34.06
CDX97099	Canola	plastid	33.2	34.04
Os01t0610600-01	Rice	mitochondrion	37.61	32.12
TraesCS3B01G248600.1	Wheat	mitochondrion	37.48	31.55
TraesCS3D01G233900.2	Wheat	mitochondrion	37.48	31.55
TraesCS3A01G218500.4	Wheat	mitochondrion	37.09	31.36
GSMUA_Achr6P09650_001	Banana	nucleus	18.55	30.3
Solyc08g067420.2.1	Tomato	plastid	33.59	29.67
KRH05096	Soybean	cytosol	19.07	28.82
GSMUA_AchrUn_...	Banana	cytosol	8.95	21.77
GSMUA_Achr4P17200_001	Banana	cytosol	14.53	19.18
GSMUA_Achr9P25420_001	Banana	cytosol	14.4	19.04
GSMUA_Achr9P11040_001	Banana	cytosol, peroxisome, vacuole	14.14	18.89
GSMUA_Achr6P29710_001	Banana	endoplasmic reticulum, golgi	14.14	14.93
CDX97100	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr1P14560_001	EnsemblPlants:GSMUA_Achr1T14560_001	EnsemblPlantsGene:GSMUA_Achr1G14560_001	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	SEG:seg	SUPFAM:SSF56219
UniParc:UPI0002955237	UniProt:M0RZW4	MapMan:35.1	:	:	:

Description

Putative uncharacterized protein Sb03g027610 [Source:GMGC_GENE;Acc:GSMUA_Achr1G14560_001]

Coordinates

chr1:-:11029072..11041757

Molecular Weight (calculated)

86103.1 Da

IEP (calculated)

5.414

GRAVY (calculated)

-0.541

Length

771 amino acids

Sequence
(BLAST)

001: MEGGAAPSSV SGGSHFRAVR DANYDWTRSQ KGGAAWYPRG APHQSFGRWR PPSFGPLPPP RPSYGLPPPY YGPPPPPAYA PALPPYGHPP PSHDSPPSPF
101: LPPRSSYSPS TFRPQAFRPS PPPRPADYRT WSFCLSQPPP QCERFVMLSY NILADYLARD HRSKLYFHIP QYILDWEWRK RKLLLEFRLW APDIMCLQEV
201: DRFYDLEKEL ATQGYAGIWK MRTGDAVDGC AIFWRTNRFQ LKYVETIEFK KLGLRDNVAQ ICVLESTIQS SVKNESASLL KSSDQLRQAN QVVVCNIHVL
301: YNPKRGEIKL GQVRTLLHRA YAVSKIWNDA PVIVCGDFNS TPKSPLYNFI AEQKLTLSGL ARDQISGQYS ACISSSRPYY GPGTSRTQPH MSGGTEVNCK
401: PQNKEENQYV TKEAPVREAT SNGLLDIPQI FSESRLLDKT CTVPDVATNK IGGESFCSES CSADDSNLQV SNNTCRSCIQ PITDQGTALE ISSIDQCSAG
501: VHSDMSRSTI EFSGSKQNMF DESNDDYESP SFQTIKASDI VADSAAQASE TSAGTACQDV LVDNVVQKEN CSYIGAPSSK EYSGSSSTTC LDISYYHNES
601: KQSVNDVASL SAEFDSTVNL FNNCLENHNS VGEVENICKD ISCSEENSDP DFFRELLGTD DVRHFGDDPV TSGQNHSFDS SHNDGFERRS YDPYLWTPME
701: IEVASGSAEC NFLEHSLKLR SVYTDVEDYV GTKDSSREPL VTSYNRRFMG TVDYIWLLSL SHHLIIIHVQ W

Best Arabidopsis Sequence Match ( AT5G11350.3 )
(BLAST)

001: MRRSRFVAQV FSDVTFADAS TISAPIFTMS TRAPYRGARG RGRGRGGRSF SDRPYNDDAG RDQFVTGDSH FQSVHDANFR FRHGEPYRQH QPPLDQRQQP
101: PFNQNYEFRP PPPSRGQWQQ FRQPNQFPSN QNYAACPPPP FYQNQMSRPP PQQSFRQRPR SKPSDYREWE YAKTPPSPGS EKFVVLSYNI LADYLANDHW
201: RSLYFHIPRN MLSWGWRKSK LVFELSLWSA DIMCLQEVDK FQDLEEEMKH RGYSAIWKMR TGNAVDGCAI FWRSNRFKLV HEESIQFNQL GLRDNVAQIC
301: VLETLLTSHT KENETPPPES SAGSHRVVIC NIHVLFNPKR GDFKLGQVRT LLDKAHAVSK LWDDAPIVLC GDFNCTPKSP LYNFISDRKL DLSGLARDKV
401: SGQVSAEFRP PRPENYTTRY QSANKSPQGQ VQPPNLITNA HMENNSNIDV GTAPSEKTSE LPCGDTILAG HEATSSSDQV LPCENMASDC QFGIENRKPD
501: DSGNLSTAED LSSLTISDTE PQHASSARED LNTDRSVSSG LSETEQTPEE ICSSDQDISS SLSTKVDTFV AEMKLDGLKL DEPVVFAQDE ESLGEDGETF
601: LAKLHDNNEN LSQKGELVSE VPLKWSSEAL NSDKITYSPS SWTPMEIATA TGDPERTTVE HALELKSTYS EVEGQANTRD ENGEPVVTSY HRCFMGTVDY
701: IWY

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT5G11350]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.