Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48475 | Soybean | cytosol | 34.75 | 57.14 |
| KRH39200 | Soybean | nucleus, plastid | 47.03 | 51.87 |
| Solyc03g119570.1.1 | Tomato | nucleus | 44.28 | 50.0 |
| VIT_17s0000g03760.t01 | Wine grape | nucleus | 48.73 | 49.68 |
| CDX96494 | Canola | plastid | 44.28 | 47.39 |
| CDX73024 | Canola | plastid | 43.86 | 45.59 |
| Bra015956.1-P | Field mustard | plastid | 43.86 | 45.49 |
| GSMUA_Achr7P12580_001 | Banana | mitochondrion | 30.51 | 44.72 |
| AT1G73875.1 | Thale cress | nucleus | 43.01 | 44.71 |
| PGSC0003DMT400014627 | Potato | nucleus | 41.74 | 44.37 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.1 | 23.97 |
| GSMUA_Achr1P14560_001 | Banana | nucleus | 30.3 | 18.55 |
| GSMUA_Achr4P17200_001 | Banana | cytosol | 22.25 | 17.98 |
| GSMUA_Achr9P11040_001 | Banana | cytosol, peroxisome, vacuole | 21.61 | 17.68 |
| GSMUA_Achr9P25420_001 | Banana | cytosol | 20.97 | 16.98 |
| GSMUA_Achr6P29710_001 | Banana | endoplasmic reticulum, golgi | 19.28 | 12.47 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P09650_001 | EnsemblPlants:GSMUA_Achr6T09650_001 | EnsemblPlantsGene:GSMUA_Achr6G09650_001 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | InterPro:IPR036691 |
| PANTHER:PTHR12121 | PANTHER:PTHR12121:SF51 | PFAM:PF03372 | SUPFAM:SSF56219 | UniParc:UPI0002955816 | UniProt:M0T5L4 |
| MapMan:35.1 | : | : | : | : | : |
Description
Putative Carbon catabolite repressor protein 4 homolog 5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G09650_001]
Coordinates
chr6:+:6513459..6524180
Molecular Weight (calculated)
53845.0 Da
IEP (calculated)
8.256
GRAVY (calculated)
-0.503
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGTAPRER PPAQHRPLLD HRKRKHQAEG GRSDPAHNAK RRRTGGRPDD GARQWVFSPR DLSSFKERFV IVSYNILGVE NALKHLDLYD SIPSECLSWD
101: LRKRRMHKEL RSYNPSILCF QEVDKFDDLA DLFREDGYTG IYKQRTGEAT DGCAIFWKEK EFTLLYQEDI EFQKFGLRNN VAQLCLLKSS VVSDLARAKL
201: ETQSYVFSLM YSLLSIFIPI VQVSLNQSND QVDKDAGSEI EPVSCRTLLV GNIHVLFNPN RGDIKLGQMR VLLERANTLS KQYGNTPVVI SGDLNSTPKS
301: AICQFLTSNE LDILQYDRKN ISGQIEYPVR QMTYAIQHDR FRSFQYETLQ QKFRWSEEEV CLASGRRGCT RLQNPLTLSS AYRGVPGNLH TRDENGEPLA
401: TSCHSKFMGT VDYIWHSSAL VPVGVVDTLT IKVLRRLRGL PSKKWGSDHL ALVCKFAFID DEANAASTMD NH
101: LRKRRMHKEL RSYNPSILCF QEVDKFDDLA DLFREDGYTG IYKQRTGEAT DGCAIFWKEK EFTLLYQEDI EFQKFGLRNN VAQLCLLKSS VVSDLARAKL
201: ETQSYVFSLM YSLLSIFIPI VQVSLNQSND QVDKDAGSEI EPVSCRTLLV GNIHVLFNPN RGDIKLGQMR VLLERANTLS KQYGNTPVVI SGDLNSTPKS
301: AICQFLTSNE LDILQYDRKN ISGQIEYPVR QMTYAIQHDR FRSFQYETLQ QKFRWSEEEV CLASGRRGCT RLQNPLTLSS AYRGVPGNLH TRDENGEPLA
401: TSCHSKFMGT VDYIWHSSAL VPVGVVDTLT IKVLRRLRGL PSKKWGSDHL ALVCKFAFID DEANAASTMD NH
001: MSGYERKNTT ANSITITKRK RNSISEQSEN VYEKSNRKES ITLKPHRSFT PGFSQRDCKP VRHSKSSLRR RRRTKEKISS SVEREWVFSA NNFENLADKL
101: VLVSYNLLGV DNASNHMDLY YNVPRKHLEW SRRKHLICKE ISRYNASILC LQEVDRFDDL DVLLKNRGFR GVHKSRTGEA SDGCAIFWKE NLFELLDHQH
201: IEFDKFGMRN NVAQLCVLEM NCEEDPKSKL RVRSSDPRRL VVGNIHVLFN PKRGDIKLGQ VRLFLEKAYK LSQEWGNIPV AIAGDLNSTP QSAIYDFIAS
301: ADLDTQLHDR RQISGQTEVE PKERSFRNHY AFSASASISG SLLNEWSQEE LQLATGGQET THVQHQLKLN SAYSGVPGTY RTRDQRGEPL ATTYHSRFLG
401: TVDYIWHTKE LVPVRVLETL PADVLRRTGG LPSENWGSDH LAIACELGFV NDWQ
101: VLVSYNLLGV DNASNHMDLY YNVPRKHLEW SRRKHLICKE ISRYNASILC LQEVDRFDDL DVLLKNRGFR GVHKSRTGEA SDGCAIFWKE NLFELLDHQH
201: IEFDKFGMRN NVAQLCVLEM NCEEDPKSKL RVRSSDPRRL VVGNIHVLFN PKRGDIKLGQ VRLFLEKAYK LSQEWGNIPV AIAGDLNSTP QSAIYDFIAS
301: ADLDTQLHDR RQISGQTEVE PKERSFRNHY AFSASASISG SLLNEWSQEE LQLATGGQET THVQHQLKLN SAYSGVPGTY RTRDQRGEPL ATTYHSRFLG
401: TVDYIWHTKE LVPVRVLETL PADVLRRTGG LPSENWGSDH LAIACELGFV NDWQ
Arabidopsis Description
CCR4-5Carbon catabolite repressor protein 4 homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WKY2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.