Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48475 | Soybean | cytosol | 42.55 | 68.64 |
| KRH39200 | Soybean | nucleus, plastid | 57.67 | 62.38 |
| Solyc03g119570.1.1 | Tomato | nucleus | 55.72 | 61.72 |
| AT1G73875.1 | Thale cress | nucleus | 54.86 | 55.95 |
| PGSC0003DMT400014627 | Potato | nucleus | 53.56 | 55.86 |
| CDX96494 | Canola | plastid | 52.48 | 55.1 |
| CDX73024 | Canola | plastid | 52.27 | 53.3 |
| Bra015956.1-P | Field mustard | plastid | 52.05 | 52.97 |
| GSMUA_Achr6P09650_001 | Banana | nucleus | 49.68 | 48.73 |
| VIT_17s0000g04030.t01 | Wine grape | plastid | 41.25 | 43.31 |
| VIT_02s0087g00390.t01 | Wine grape | mitochondrion | 18.79 | 22.14 |
| VIT_04s0008g04720.t01 | Wine grape | mitochondrion | 35.42 | 20.87 |
| VIT_08s0007g07020.t01 | Wine grape | cytosol | 25.7 | 19.73 |
| VIT_18s0001g05590.t01 | Wine grape | cytosol | 18.79 | 18.95 |
Protein Annotations
| EntrezGene:100252635 | MapMan:35.1 | ProteinID:CCB43216 | ProteinID:CCB43216.1 | ncoils:Coil | InterPro:Endo/exonu/phosph_ase_sf |
| InterPro:Endo/exonuclease/phosphatase | UniProt:F6GTK7 | EMBL:FN594950 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR036691 | PFAM:PF03372 | PANTHER:PTHR12121 | PANTHER:PTHR12121:SF51 | SUPFAM:SSF56219 | TIGR:TC52613 |
| UniParc:UPI0002108341 | ArrayExpress:VIT_17s0000g03760 | EnsemblPlantsGene:VIT_17s0000g03760 | EnsemblPlants:VIT_17s0000g03760.t01 | RefSeq:XP_010663593.1 | SEG:seg |
Description
No Description!
Coordinates
chr17:+:3695085..3714845
Molecular Weight (calculated)
52982.1 Da
IEP (calculated)
9.836
GRAVY (calculated)
-0.651
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGGDRRLPP SVHYPATSGR KRKPSAIPKQ CHDHVKRQRL VVKEETVTLI ANGADELPTS NRFSSIQCSQ RQEKKRKKLK RRQKSATTEA HRRWVFSTRD
101: LSDYKDKVVV VSYNILGVEN ASNHPDLYSK VPTKLLDWNR RRKLINKEIN QYNPSILCFQ EVDRFNDLNN LLKKGGFKGV YKARTGEAYD GCAMFWKDDL
201: FTLLHQENIE FQNFGLRHNV AQLCVLKMNR NQSNSDVDTK ASQIPPTRSL IVGNIHVLFN PNRGDIKLGQ MRLFLEKAHK LSQEWGCIPV VLAGDLNSMP
301: QSALYQFLAS SELDVRLHDR RKISGQVEHQ SQHRAYRYQN EDASRSRPLV HRWSNEELRL ATGSDGVTHL QHCLKLCSAY YGIPGSCRTR DNYGEPLATS
401: YHSKFMGTVD YIWHTEELVP VRVLETLPVD ILRKTGGLPS EKWGSDHLAL VCELAFADDG SSS
101: LSDYKDKVVV VSYNILGVEN ASNHPDLYSK VPTKLLDWNR RRKLINKEIN QYNPSILCFQ EVDRFNDLNN LLKKGGFKGV YKARTGEAYD GCAMFWKDDL
201: FTLLHQENIE FQNFGLRHNV AQLCVLKMNR NQSNSDVDTK ASQIPPTRSL IVGNIHVLFN PNRGDIKLGQ MRLFLEKAHK LSQEWGCIPV VLAGDLNSMP
301: QSALYQFLAS SELDVRLHDR RKISGQVEHQ SQHRAYRYQN EDASRSRPLV HRWSNEELRL ATGSDGVTHL QHCLKLCSAY YGIPGSCRTR DNYGEPLATS
401: YHSKFMGTVD YIWHTEELVP VRVLETLPVD ILRKTGGLPS EKWGSDHLAL VCELAFADDG SSS
001: MSGYERKNTT ANSITITKRK RNSISEQSEN VYEKSNRKES ITLKPHRSFT PGFSQRDCKP VRHSKSSLRR RRRTKEKISS SVEREWVFSA NNFENLADKL
101: VLVSYNLLGV DNASNHMDLY YNVPRKHLEW SRRKHLICKE ISRYNASILC LQEVDRFDDL DVLLKNRGFR GVHKSRTGEA SDGCAIFWKE NLFELLDHQH
201: IEFDKFGMRN NVAQLCVLEM NCEEDPKSKL RVRSSDPRRL VVGNIHVLFN PKRGDIKLGQ VRLFLEKAYK LSQEWGNIPV AIAGDLNSTP QSAIYDFIAS
301: ADLDTQLHDR RQISGQTEVE PKERSFRNHY AFSASASISG SLLNEWSQEE LQLATGGQET THVQHQLKLN SAYSGVPGTY RTRDQRGEPL ATTYHSRFLG
401: TVDYIWHTKE LVPVRVLETL PADVLRRTGG LPSENWGSDH LAIACELGFV NDWQ
101: VLVSYNLLGV DNASNHMDLY YNVPRKHLEW SRRKHLICKE ISRYNASILC LQEVDRFDDL DVLLKNRGFR GVHKSRTGEA SDGCAIFWKE NLFELLDHQH
201: IEFDKFGMRN NVAQLCVLEM NCEEDPKSKL RVRSSDPRRL VVGNIHVLFN PKRGDIKLGQ VRLFLEKAYK LSQEWGNIPV AIAGDLNSTP QSAIYDFIAS
301: ADLDTQLHDR RQISGQTEVE PKERSFRNHY AFSASASISG SLLNEWSQEE LQLATGGQET THVQHQLKLN SAYSGVPGTY RTRDQRGEPL ATTYHSRFLG
401: TVDYIWHTKE LVPVRVLETL PADVLRRTGG LPSENWGSDH LAIACELGFV NDWQ
Arabidopsis Description
CCR4-5Carbon catabolite repressor protein 4 homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WKY2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.