Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014627 | Potato | nucleus | 90.91 | 85.59 |
| KRH48475 | Soybean | cytosol | 41.87 | 60.98 |
| VIT_17s0000g03760.t01 | Wine grape | nucleus | 61.72 | 55.72 |
| KRH39200 | Soybean | nucleus, plastid | 54.55 | 53.27 |
| CDX96494 | Canola | plastid | 52.87 | 50.11 |
| AT1G73875.1 | Thale cress | nucleus | 52.63 | 48.46 |
| CDX73024 | Canola | plastid | 52.63 | 48.46 |
| Bra015956.1-P | Field mustard | plastid | 52.39 | 48.13 |
| GSMUA_Achr6P09650_001 | Banana | nucleus | 50.0 | 44.28 |
| Solyc03g119710.2.1 | Tomato | plastid | 40.91 | 39.4 |
| Solyc08g075010.2.1 | Tomato | mitochondrion | 21.05 | 22.62 |
| Solyc10g078950.1.1 | Tomato | cytosol | 23.21 | 17.29 |
| Solyc08g067420.2.1 | Tomato | plastid | 35.89 | 17.18 |
| Solyc03g059010.2.1 | Tomato | cytosol, nucleus, plastid | 24.4 | 17.17 |
Protein Annotations
| EnsemblPlants:Solyc03g119570.1.1 | EnsemblPlantsGene:Solyc03g119570.1 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | InterPro:IPR036691 |
| ncoils:Coil | PANTHER:PTHR12121 | PANTHER:PTHR12121:SF51 | PFAM:PF03372 | SEG:seg | SUPFAM:SSF56219 |
| UniParc:UPI00027665DB | UniProt:K4BMA6 | MapMan:35.1 | : | : | : |
Description
Carbon catabolite repressor protein 4 homolog 5 [Source:Projected from Arabidopsis thaliana (AT1G73875) UniProtKB/Swiss-Prot;Acc:Q0WKY2]
Coordinates
chr3:+:68130797..68136097
Molecular Weight (calculated)
47673.3 Da
IEP (calculated)
8.877
GRAVY (calculated)
-0.631
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRTGDGRDQ PAEQPSRFSA MKSRIRQHDI GKHRSKKNRG KEKRHKGKAK RAIADDKRKW VYSTHDVSPN QDRVILMSYN ILGVKNAAAH EDLYRNVSPK
101: YLDWDYRKKL ICKEIRDYNP DIMCFQEVDR FDDLDYLLQK EGFKGVYQAR TGDASDGCAI FWNNKLFDIL HEESIEFQNF NLRNNVCQLC VFKMNVKSST
201: KDVSASNSES VSSPSFLVGN IHVLYNPNRG DIKLGQVRLF LESAQRLSHE WGDIPVVLAG DLNSMPQSAM YQFLTSNKLD IQMHDRKQIS GQIYPLQNRS
301: FNPRLSYRWS NEELLLATGT GASQLIHQLQ LRSAYAGAPG SSRTRENSGE PLATSYHSKF LGTVDYIWHT TEFVPVRVLD TLPVDILRRT GGLPSEKWGS
401: DHLSLVCELA FADEGSET
101: YLDWDYRKKL ICKEIRDYNP DIMCFQEVDR FDDLDYLLQK EGFKGVYQAR TGDASDGCAI FWNNKLFDIL HEESIEFQNF NLRNNVCQLC VFKMNVKSST
201: KDVSASNSES VSSPSFLVGN IHVLYNPNRG DIKLGQVRLF LESAQRLSHE WGDIPVVLAG DLNSMPQSAM YQFLTSNKLD IQMHDRKQIS GQIYPLQNRS
301: FNPRLSYRWS NEELLLATGT GASQLIHQLQ LRSAYAGAPG SSRTRENSGE PLATSYHSKF LGTVDYIWHT TEFVPVRVLD TLPVDILRRT GGLPSEKWGS
401: DHLSLVCELA FADEGSET
001: MSGYERKNTT ANSITITKRK RNSISEQSEN VYEKSNRKES ITLKPHRSFT PGFSQRDCKP VRHSKSSLRR RRRTKEKISS SVEREWVFSA NNFENLADKL
101: VLVSYNLLGV DNASNHMDLY YNVPRKHLEW SRRKHLICKE ISRYNASILC LQEVDRFDDL DVLLKNRGFR GVHKSRTGEA SDGCAIFWKE NLFELLDHQH
201: IEFDKFGMRN NVAQLCVLEM NCEEDPKSKL RVRSSDPRRL VVGNIHVLFN PKRGDIKLGQ VRLFLEKAYK LSQEWGNIPV AIAGDLNSTP QSAIYDFIAS
301: ADLDTQLHDR RQISGQTEVE PKERSFRNHY AFSASASISG SLLNEWSQEE LQLATGGQET THVQHQLKLN SAYSGVPGTY RTRDQRGEPL ATTYHSRFLG
401: TVDYIWHTKE LVPVRVLETL PADVLRRTGG LPSENWGSDH LAIACELGFV NDWQ
101: VLVSYNLLGV DNASNHMDLY YNVPRKHLEW SRRKHLICKE ISRYNASILC LQEVDRFDDL DVLLKNRGFR GVHKSRTGEA SDGCAIFWKE NLFELLDHQH
201: IEFDKFGMRN NVAQLCVLEM NCEEDPKSKL RVRSSDPRRL VVGNIHVLFN PKRGDIKLGQ VRLFLEKAYK LSQEWGNIPV AIAGDLNSTP QSAIYDFIAS
301: ADLDTQLHDR RQISGQTEVE PKERSFRNHY AFSASASISG SLLNEWSQEE LQLATGGQET THVQHQLKLN SAYSGVPGTY RTRDQRGEPL ATTYHSRFLG
401: TVDYIWHTKE LVPVRVLETL PADVLRRTGG LPSENWGSDH LAIACELGFV NDWQ
Arabidopsis Description
CCR4-5Carbon catabolite repressor protein 4 homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WKY2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.