Factsheet for Solyc03g119710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g04030.t01	Wine grape	plastid	59.68	58.73
KRH60320	Soybean	plastid	56.22	56.09
KRH41616	Soybean	cytosol	45.85	54.22
CDX92241	Canola	mitochondrion, nucleus, plastid	55.07	53.11
AT3G18500.3	Thale cress	nucleus	54.84	53.01
CDY24484	Canola	mitochondrion	54.15	52.22
Bra022326.1-P	Field mustard	mitochondrion, plastid	53.46	50.33
GSMUA_Achr7P12580_001	Banana	mitochondrion	36.64	49.38
Solyc03g119570.1.1	Tomato	nucleus	39.4	40.91
Zm00001d045673_P003	Maize	plastid	41.47	40.63
TraesCS7A01G206900.2	Wheat	plastid	41.71	40.49
TraesCS7D01G209700.2	Wheat	plastid	41.47	40.27
TraesCS7B01G114200.1	Wheat	plastid	40.78	39.69
Os06t0264900-00	Rice	plastid	27.88	39.54
EER89572	Sorghum	plastid	42.17	39.1
HORVU0Hr1G020140.2	Barley	mitochondrion, nucleus	41.01	38.7
HORVU7Hr1G042150.3	Barley	nucleus, plastid	41.94	37.14
Solyc08g075010.2.1	Tomato	mitochondrion	21.2	23.65
Solyc08g067420.2.1	Tomato	plastid	37.79	18.79
Solyc03g059010.2.1	Tomato	cytosol, nucleus, plastid	23.27	17.0
Solyc10g078950.1.1	Tomato	cytosol	20.51	15.86

Protein Annotations

EnsemblPlants:Solyc03g119710.2.1	EnsemblPlantsGene:Solyc03g119710.2	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691	PANTHER:PTHR12121
PANTHER:PTHR12121:SF48	PFAM:PF03372	SUPFAM:SSF56219	UniParc:UPI00027667B1	UniProt:K4BMC0	MapMan:35.1

Description

No Description!

Coordinates

chr3:+:68251318..68261539

Molecular Weight (calculated)

49158.2 Da

IEP (calculated)

9.134

GRAVY (calculated)

-0.298

Length

434 amino acids

Sequence
(BLAST)

001: MGCCCRAGSS WLTTPRLIMN AATLNFRPIF NMCYMSFHRN NTSSPTASYS RRWYKSGSRG GISQEHEIVR HWVQGDALPG GKHHEERFTV ASYNILGDRN
101: VSNHGDLYRN VPPAYLDWDH RRRVICEELL GLNPDIICLQ EVDKYNDLLN ILEKAGYLGS YKRRTGGSVD GCAMFWKADK FQLLEGESVE FRQHGLRDNV
201: AQLSVFEMRE AKSRRLVVGN IHVLYNPNRG DVKLGQIRFL ASRAHILSEK WDHVPIVLSP IYKFLSSSEL NLMLHNRKEL SGQRLCHPSQ VLGLRREKGI
301: LFVLMDRFFN SRWSDEEINV AIGALKSHIA MHPLKLNSSY AMVKGPLTTR DNSGEPLATS FHSKFLGTVD YLWYSDGLAP TKVLDTLPIN VLKKTGGLPY
401: KKLGSDHLAL VSEFAFLEVI GATEDRLSVK GDIC

Best Arabidopsis Sequence Match ( AT3G18500.3 )
(BLAST)

001: MRCVNRVDCS WSRPSEAYRI LPSGGHLSSG FHQCPLSSLS FRSSFVCCSS STSGPSDSNP ESSSNRSYSR RWQNPLPRRQ HPDQIPSSQI ARDWIDSDTT
101: PVSQALERFT VVSYNILGDG NSSYHRELYS NVSVPYLKWG YRKRLICEEL IRLNPDIISM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAMFWKAD
201: RFGVLERENI EFSQFGMRDN VAQLAVLELR KSNKSRKILL GNIHVLYNPN QGDVKLGQVR SLCSKAHLLS KKWGDIPIVL CGDFNSTPKS PLYNFLASSE
301: LNVMEHDKKE LSGQKNCRPT KVLETGSKSS NTITFRSFCS SWTKEEIRVA TGQENSYWAA HPLKLNSSYA SVKGSANTRD SVGEPLATSY HSKFLGTVDY
401: LWYSDGLLPA RVLDTLPIDV LCKTKGLPCQ ELGSDHLALV SEFVFEPDG

Arabidopsis Description

DNAse I-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8R6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.