Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89572 | Sorghum | plastid | 91.87 | 86.97 |
| Os06t0264900-00 | Rice | plastid | 51.24 | 74.18 |
| TraesCS7A01G206900.2 | Wheat | plastid | 74.49 | 73.83 |
| TraesCS7B01G114200.1 | Wheat | plastid | 73.59 | 73.09 |
| TraesCS7D01G209700.2 | Wheat | plastid | 73.59 | 72.93 |
| HORVU7Hr1G042150.3 | Barley | nucleus, plastid | 75.62 | 68.37 |
| HORVU0Hr1G020140.2 | Barley | mitochondrion, nucleus | 69.75 | 67.17 |
| GSMUA_Achr7P12580_001 | Banana | mitochondrion | 36.57 | 50.31 |
| VIT_17s0000g04030.t01 | Wine grape | plastid | 45.82 | 46.03 |
| KRH60320 | Soybean | plastid | 42.44 | 43.22 |
| CDX92241 | Canola | mitochondrion, nucleus, plastid | 43.34 | 42.67 |
| KRH41616 | Soybean | cytosol | 35.21 | 42.51 |
| CDY24484 | Canola | mitochondrion | 42.66 | 42.0 |
| Solyc03g119710.2.1 | Tomato | plastid | 40.63 | 41.47 |
| AT3G18500.3 | Thale cress | nucleus | 41.53 | 40.98 |
| Bra022326.1-P | Field mustard | mitochondrion, plastid | 41.76 | 40.13 |
| Zm00001d038091_P006 | Maize | plastid | 20.99 | 22.63 |
| Zm00001d044447_P007 | Maize | mitochondrion | 25.51 | 19.76 |
| Zm00001d032979_P003 | Maize | cytosol | 23.7 | 17.36 |
| Zm00001d014187_P011 | Maize | cytosol | 23.25 | 17.08 |
| Zm00001d027811_P001 | Maize | mitochondrion | 24.38 | 16.77 |
Protein Annotations
| EnsemblPlants:Zm00001d045673_P003 | EnsemblPlants:Zm00001d045673_T003 | EnsemblPlantsGene:Zm00001d045673 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase |
| InterPro:IPR036691 | PANTHER:PTHR12121 | PANTHER:PTHR12121:SF48 | PFAM:PF03372 | ProteinID:AQL02956.1 | SEG:seg |
| SUPFAM:SSF56219 | UniParc:UPI000221F67D | UniProt:K7WBG7 | MapMan:35.1 | : | : |
Description
Carbon catabolite repressor protein 4 homolog 3
Coordinates
chr9:-:32620544..32634122
Molecular Weight (calculated)
50369.2 Da
IEP (calculated)
6.954
GRAVY (calculated)
-0.590
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRGAMPST APRARLSPPA PASHPPRKRG RSPSAPGSTA SWRASAENTV PLYHRRRWHN PERAPGRVWQ RFRAPQPALL SSRLWICSED ASTSSSGDAC
101: TIMSYNILAD YNARNHPDLY LDAPWDAMRW DSRRRLIIRE IRHWDPDVVC LQEVDRFQDI AAGMKSRGYE GIFQRRTGDT RDGCAIFWKS KQLHLVEEDS
201: IDFSEFNLRN NVAQICVFEL NGTHKFVLGN IHVLFNPKRG DVKLGQIRML LENANALAEK WDKIPIVLAG DFNSTPDSAI YKFLSTMKLN ISLHDRRHLS
301: GLDSTEFGYE LCSLLKYQWT DEEVRNATGY SNVMVAEHPL KLSSSYAMLK GNSNNRGLHG EPLATSYHRK FLGTVDYLWH THGIECSRVL DTLPISVLKR
401: TRGLPTREIG SDHLPIVAEF AFTESVEDDS DEDDESEQDD ESE
101: TIMSYNILAD YNARNHPDLY LDAPWDAMRW DSRRRLIIRE IRHWDPDVVC LQEVDRFQDI AAGMKSRGYE GIFQRRTGDT RDGCAIFWKS KQLHLVEEDS
201: IDFSEFNLRN NVAQICVFEL NGTHKFVLGN IHVLFNPKRG DVKLGQIRML LENANALAEK WDKIPIVLAG DFNSTPDSAI YKFLSTMKLN ISLHDRRHLS
301: GLDSTEFGYE LCSLLKYQWT DEEVRNATGY SNVMVAEHPL KLSSSYAMLK GNSNNRGLHG EPLATSYHRK FLGTVDYLWH THGIECSRVL DTLPISVLKR
401: TRGLPTREIG SDHLPIVAEF AFTESVEDDS DEDDESEQDD ESE
001: MRCVNRVDCS WSRPSEAYRI LPSGGHLSSG FHQCPLSSLS FRSSFVCCSS STSGPSDSNP ESSSNRSYSR RWQNPLPRRQ HPDQIPSSQI ARDWIDSDTT
101: PVSQALERFT VVSYNILGDG NSSYHRELYS NVSVPYLKWG YRKRLICEEL IRLNPDIISM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAMFWKAD
201: RFGVLERENI EFSQFGMRDN VAQLAVLELR KSNKSRKILL GNIHVLYNPN QGDVKLGQVR SLCSKAHLLS KKWGDIPIVL CGDFNSTPKS PLYNFLASSE
301: LNVMEHDKKE LSGQKNCRPT KVLETGSKSS NTITFSSWTK EEIRVATGQE NSYWAAHPLK LNSSYASVKG SANTRDSVGE PLATSYHSKF LGTVDYLWYS
401: DGLLPARVLD TLPIDVLCKT KGLPCQELGS DHLALVSEFV FEPDG
101: PVSQALERFT VVSYNILGDG NSSYHRELYS NVSVPYLKWG YRKRLICEEL IRLNPDIISM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAMFWKAD
201: RFGVLERENI EFSQFGMRDN VAQLAVLELR KSNKSRKILL GNIHVLYNPN QGDVKLGQVR SLCSKAHLLS KKWGDIPIVL CGDFNSTPKS PLYNFLASSE
301: LNVMEHDKKE LSGQKNCRPT KVLETGSKSS NTITFSSWTK EEIRVATGQE NSYWAAHPLK LNSSYASVKG SANTRDSVGE PLATSYHSKF LGTVDYLWYS
401: DGLLPARVLD TLPIDVLCKT KGLPCQELGS DHLALVSEFV FEPDG
Arabidopsis Description
DNAse I-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8R6]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.