Factsheet for Zm00001d014187_P011

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003300_P001
Zm00001d017072_P002
Zm00001d026036_P001
Zm00001d030053_P003
Zm00001d040272_P001
Zm00001d047042_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G58560.1	Zm00001d026036_P001	AT4G17950.1	21798944
AT3G58560.1	Zm00001d030053_P003	AT4G17950.1	21798944
AT3G58560.1	Zm00001d047042_P004	AT4G17950.1	21798944
AT3G58560.1	Zm00001d003300_P001	AT4G24690.1	21798944
AT3G58560.1	Zm00001d017072_P002	AT4G24690.1	21798944
AT3G58560.1	Zm00001d040272_P001	AT4G24690.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91798	Sorghum	cytosol	96.35	95.87
Zm00001d032979_P003	Maize	cytosol	95.19	94.88
Os10t0412100-01	Rice	cytosol	89.72	89.42
TraesCS1B01G153300.2	Wheat	cytosol	87.89	87.6
HORVU1Hr1G035390.1	Barley	cytosol	87.89	87.6
TraesCS1D01G134400.1	Wheat	cytosol	87.89	87.6
TraesCS1A01G137900.1	Wheat	cytosol	87.73	87.44
KRH71803	Soybean	cytosol	24.88	81.52
Zm00001d027811_P001	Maize	mitochondrion	82.09	76.86
VIT_08s0007g07020.t01	Wine grape	cytosol	75.79	75.79
GSMUA_Achr9P25420_001	Banana	cytosol	71.97	74.44
PGSC0003DMT400029795	Potato	cytosol	74.63	74.38
KRG96349	Soybean	cytosol	73.13	73.5
GSMUA_Achr4P17200_001	Banana	cytosol	70.98	73.29
KRH38033	Soybean	cytosol	72.8	73.17
KRH68083	Soybean	cytosol	72.97	73.09
Solyc10g078950.1.1	Tomato	cytosol	67.66	72.73
AT3G58560.1	Thale cress	cytosol	72.47	72.59
GSMUA_Achr9P11040_001	Banana	cytosol, peroxisome, vacuole	68.49	71.58
CDY00572	Canola	cytosol	70.65	71.0
CDX67753	Canola	cytosol	70.48	70.83
Bra014566.1-P	Field mustard	cytosol	70.48	70.83
Solyc03g059010.2.1	Tomato	cytosol, nucleus, plastid	69.65	70.71
CDX67751	Canola	cytosol	69.32	70.61
AT3G58580.1	Thale cress	cytosol	70.48	70.48
Bra003344.1-P	Field mustard	cytosol	66.83	70.33
Bra003342.1-P	Field mustard	cytosol	68.99	70.27
CDX98303	Canola	cytosol	68.82	70.1
CDX88992	Canola	mitochondrion	64.18	69.86
Bra007403.1-P	Field mustard	cytosol	69.15	69.85
CDX71943	Canola	cytosol	69.49	69.6
CDY49233	Canola	cytosol	68.99	69.33
KRH71804	Soybean	cytosol	43.62	68.67
CDX98305	Canola	plastid	69.65	65.93
GSMUA_Achr6P29710_001	Banana	endoplasmic reticulum, golgi	64.84	53.56
Zm00001d038091_P006	Maize	plastid	16.25	23.84
Zm00001d045673_P003	Maize	plastid	17.08	23.25
Zm00001d044447_P007	Maize	mitochondrion	13.43	14.16

Protein Annotations

EnsemblPlants:Zm00001d014187_P011	EnsemblPlants:Zm00001d014187_T011	EnsemblPlantsGene:Zm00001d014187	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	InterPro:Zfn-C6H2	PANTHER:PTHR12121	PANTHER:PTHR12121:SF29	PFAM:PF03372	PFAM:PF15801
ProteinID:AQK65493.1	ProteinID:AQK65495.1	ProteinID:AQK65500.1	ProteinID:AQK65505.1	ProteinID:AQK65507.1	ProteinID:AQK65508.1
SEG:seg	SUPFAM:SSF56219	UniParc:UPI000221D898	UniProt:A0A096QHL5	MapMan:16.8.2.1.2.1	:

Description

Carbon catabolite repressor protein 4 homolog 1

Coordinates

chr5:+:35495667..35510709

Molecular Weight (calculated)

66801.3 Da

IEP (calculated)

6.684

GRAVY (calculated)

-0.288

Length

603 amino acids

Sequence
(BLAST)

001: MLSVVRVHLP SEIPIVGCEV TPYVLLRRPD GAVSTDDVPE TAPADGQFMR YRWYRIQSDR KVPICSVHPM EQATIQCLGC LKSKIPVAKS YHCSAKCFSD
101: AWQHHKVLHE RASSAQNENG AEEEELCGSG GSGVLSTAGS GSLSNFGQSP SINNEPVPLY PSGTDKNSGE TWYEVGRLRT YTPTAADIGH ALKFECVAVD
201: SEKRSPIGPP TSVMTSHVIP APTPTPRRLI QVNGDVLGHL DLDSQTSSLG TFTVLSYNIL ADTYATSDAY SYCPTWALTW TYRRQNLLRE IIGYHADIIC
301: LQEVQVNHFE DFFSPELDRH GYQALYKKRT TEVYSGNPMA IDGCATFFRR DKFSHVKKYE VEFNKAAQSL TDAIIPSAQK RLALNRLIKD NIALIAVLEA
401: KFANHGAENP GKRQLLCVAN THINVHQDLK DVKLWEVHTL LKGLEKIAVS ADIPMLVCGD FNSPPGSSPH ALLAMGKVDQ HHPDLAIDPL GILRPPSKLN
501: HQLPLVSAYS AFARMVGVGY DLEHQRRRTD PATNEPLFTN CTRDFTGTVD YIFYTADSLT VDSLLELLDE ESLRKDTALP SPGWSSDHIA LLAEFRCKPR
601: IRS

Best Arabidopsis Sequence Match ( AT3G58560.1 )
(BLAST)

001: MLSVIRVHLP SEIPIVGCEL TPYVLLRRPD KTPSTDDVPE SAPLEGHFLK YRWFRVQSDK KVAICSVHPS ETATLQCLGC LKSKVPVAKS YHCSTKCFSD
101: AWQHHRVLHE RAASAATEGN DEEELPRLNS SGSGSGVLST SVSLTNGSSS VYPSAITQKT GAGGETLVEV GRSKTYTPMA DDICHVLKFE CVVVNAETKQ
201: NVGLSCTILT SRVIPAPSPS PRRLISISGT DVTGHLDSNG RPLSMGTFTV LSYNILSDTY ASSDIYSYCP TWALAWTYRR QNLLREIVKY RADIVCLQEV
301: QNDHFEEFFL PELDKHGYQG LFKRKTNEVF IGNTNTIDGC ATFFRRDRFS HVKKYEVEFN KAAQSLTEAI IPVSQKKNAL NRLVKDNVAL IVVLEAKFGS
401: QAADNPGKRQ LLCVANTHVN VPHELKDVKL WQVHTLLKGL EKIAASADIP MLVCGDFNTV PASAPHTLLA VGKVDPLHPD LMVDPLGILR PHSKLTHQLP
501: LVSAYSQFAK MGGNVITEQQ RRRLDPASSE PLFTNCTRDF IGTLDYIFYT ADTLTVESLL ELLDEESLRK DTALPSPEWS SDHIALLAEF RCMPRARRNN
601: IL

Arabidopsis Description

CCR4-1Carbon catabolite repressor protein 4 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W0Z9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.