Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00572 | Canola | cytosol | 92.7 | 93.17 |
| Bra014566.1-P | Field mustard | cytosol | 92.37 | 92.83 |
| CDX88992 | Canola | mitochondrion | 85.07 | 92.6 |
| CDX67753 | Canola | cytosol | 91.04 | 91.5 |
| Bra003344.1-P | Field mustard | cytosol | 86.57 | 91.1 |
| Bra007403.1-P | Field mustard | cytosol | 88.56 | 89.45 |
| CDX71943 | Canola | cytosol | 89.05 | 89.2 |
| CDY49233 | Canola | cytosol | 88.39 | 88.83 |
| CDX98305 | Canola | plastid | 90.55 | 85.71 |
| KRH71803 | Soybean | cytosol | 25.87 | 84.78 |
| VIT_08s0007g07020.t01 | Wine grape | cytosol | 77.61 | 77.61 |
| KRG96349 | Soybean | cytosol | 76.45 | 76.83 |
| AT3G58560.1 | Thale cress | cytosol | 76.12 | 76.25 |
| KRH68083 | Soybean | cytosol | 76.12 | 76.25 |
| PGSC0003DMT400029795 | Potato | cytosol | 76.45 | 76.2 |
| KRH38033 | Soybean | cytosol | 75.79 | 76.17 |
| Solyc10g078950.1.1 | Tomato | cytosol | 70.15 | 75.4 |
| Os10t0412100-01 | Rice | cytosol | 72.31 | 72.07 |
| HORVU1Hr1G035390.1 | Barley | cytosol | 71.97 | 71.74 |
| Solyc03g059010.2.1 | Tomato | cytosol, nucleus, plastid | 70.65 | 71.72 |
| TraesCS1B01G153300.2 | Wheat | cytosol | 71.81 | 71.57 |
| TraesCS1D01G134400.1 | Wheat | cytosol | 71.81 | 71.57 |
| KRH71804 | Soybean | cytosol | 45.44 | 71.54 |
| GSMUA_Achr9P25420_001 | Banana | cytosol | 69.15 | 71.53 |
| TraesCS1A01G137900.1 | Wheat | cytosol | 71.64 | 71.41 |
| OQU91798 | Sorghum | cytosol | 71.64 | 71.29 |
| Zm00001d032979_P003 | Maize | cytosol | 71.48 | 71.24 |
| GSMUA_Achr4P17200_001 | Banana | cytosol | 68.99 | 71.23 |
| Os03t0166800-01 | Rice | cytosol | 71.48 | 71.0 |
| Zm00001d014187_P011 | Maize | cytosol | 70.48 | 70.48 |
| KXG40109 | Sorghum | mitochondrion | 71.81 | 69.84 |
| GSMUA_Achr9P11040_001 | Banana | cytosol, peroxisome, vacuole | 66.67 | 69.67 |
| Zm00001d027811_P001 | Maize | mitochondrion | 70.81 | 66.3 |
| GSMUA_Achr6P29710_001 | Banana | endoplasmic reticulum, golgi | 62.52 | 51.64 |
| AT1G31530.1 | Thale cress | cytosol | 12.11 | 25.8 |
| AT3G18500.3 | Thale cress | nucleus | 18.74 | 25.17 |
| AT1G31500.7 | Thale cress | mitochondrion | 17.25 | 24.64 |
| AT1G73875.1 | Thale cress | nucleus | 17.91 | 23.79 |
| AT5G11350.4 | Thale cress | nucleus | 20.4 | 16.29 |
Protein Annotations
| MapMan:16.8.2.1.2.1 | Gene3D:3.60.10.10 | EntrezGene:825027 | UniProt:A0A178VDG0 | ProteinID:AEE79801.1 | EMBL:AK226830 |
| ArrayExpress:AT3G58580 | EnsemblPlantsGene:AT3G58580 | RefSeq:AT3G58580 | TAIR:AT3G58580 | RefSeq:AT3G58580-TAIR-G | EnsemblPlants:AT3G58580.1 |
| TAIR:AT3G58580.1 | Unigene:At.34714 | ProteinID:CAB68196.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004527 | GO:GO:0004535 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046872 | GO:GO:0090305 | GO:GO:0090503 | InterPro:IPR036691 |
| RefSeq:NP_191417.2 | ProteinID:OAP02973.1 | PFAM:PF03372 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR12121 | PANTHER:PTHR12121:SF29 | UniProt:Q9M2F8 | SUPFAM:SSF56219 | UniParc:UPI00015057EB | SEG:seg |
Description
CCR4-2Carbon catabolite repressor protein 4 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2F8]
Coordinates
chr3:-:21660598..21664095
Molecular Weight (calculated)
67056.8 Da
IEP (calculated)
7.571
GRAVY (calculated)
-0.324
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSVIRVHLP SEIPIVGCEL TPYVLVRRPD KNSTTDDVPE SAPLEGYFLR YRWYRVQSDK KVTICSVHPT EQATLQCVFC SKRRSLVPKS YHCSPKCFTD
101: AWQHHRTLHE RAAAENNANE DDDLNRNNSA GSGSLAGSLS GSMSNLSIAN NGPAPFYPSN ITQKNGGETL VEVGGCKTYT PTADDISHVL KFECVVANAE
201: TKQIVGHPST ILTSRVIPAP SPSPRKLIPV NGADGMGHLD QDARIQSAGS FTVLSYNILS DTSASSDLYS YCPPWALSWP YRRQNLLREI VGYRADVVCL
301: QEVQSDHFHE IFAPELDKHG YQALYKRKTN EVLSGSTSAI DGCATFFRRD RFSHVKKYDV EFNKAAQSLT DALIPQAQKR TALNRLVKDN IALIVVLEAK
401: FGNQPTDPSG KRQLICVANT HVNVQQDLKD VKLWQVHTLL KGLEKIAASA DIPMLVCGDF NTLPGSAPHT LLVMGKVDPM HPDLAVDPLN ILRPHTKLTH
501: QLPLVSAYSS FVRKGIMGLG LEQHRRRIDL NTNEPLFTNC TRDFIGTHDY IFYTADTLMV ESLLELLDED GLRKDTALPS PEWSSNHIAL LAEFRCTPRT
601: RRG
101: AWQHHRTLHE RAAAENNANE DDDLNRNNSA GSGSLAGSLS GSMSNLSIAN NGPAPFYPSN ITQKNGGETL VEVGGCKTYT PTADDISHVL KFECVVANAE
201: TKQIVGHPST ILTSRVIPAP SPSPRKLIPV NGADGMGHLD QDARIQSAGS FTVLSYNILS DTSASSDLYS YCPPWALSWP YRRQNLLREI VGYRADVVCL
301: QEVQSDHFHE IFAPELDKHG YQALYKRKTN EVLSGSTSAI DGCATFFRRD RFSHVKKYDV EFNKAAQSLT DALIPQAQKR TALNRLVKDN IALIVVLEAK
401: FGNQPTDPSG KRQLICVANT HVNVQQDLKD VKLWQVHTLL KGLEKIAASA DIPMLVCGDF NTLPGSAPHT LLVMGKVDPM HPDLAVDPLN ILRPHTKLTH
501: QLPLVSAYSS FVRKGIMGLG LEQHRRRIDL NTNEPLFTNC TRDFIGTHDY IFYTADTLMV ESLLELLDED GLRKDTALPS PEWSSNHIAL LAEFRCTPRT
601: RRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.