Factsheet for Bra014566.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88992	Canola	mitochondrion	91.83	99.46
Bra003344.1-P	Field mustard	cytosol	90.0	94.24
AT3G58580.1	Thale cress	cytosol	92.83	92.37
Bra007403.1-P	Field mustard	cytosol	90.83	91.29
KRH71803	Soybean	cytosol	25.5	83.15
Bra003342.1-P	Field mustard	cytosol	76.83	77.87
KRH38033	Soybean	cytosol	77.33	77.33
PGSC0003DMT400029795	Potato	cytosol	77.33	76.69
KRG96349	Soybean	cytosol	76.67	76.67
VIT_08s0007g07020.t01	Wine grape	cytosol	77.0	76.62
KRH68083	Soybean	cytosol	76.5	76.25
Solyc10g078950.1.1	Tomato	cytosol	70.5	75.4
KRH71804	Soybean	cytosol	47.17	73.89
Os10t0412100-01	Rice	cytosol	73.33	72.73
Solyc03g059010.2.1	Tomato	cytosol, nucleus, plastid	71.67	72.39
HORVU1Hr1G035390.1	Barley	cytosol	72.33	71.74
TraesCS1D01G134400.1	Wheat	cytosol	72.33	71.74
TraesCS1B01G153300.2	Wheat	cytosol	72.33	71.74
TraesCS1A01G137900.1	Wheat	cytosol	72.33	71.74
OQU91798	Sorghum	cytosol	72.17	71.45
Zm00001d032979_P003	Maize	cytosol	72.0	71.41
GSMUA_Achr4P17200_001	Banana	cytosol	69.5	71.4
GSMUA_Achr9P25420_001	Banana	cytosol	69.17	71.18
Os03t0166800-01	Rice	cytosol	72.0	71.17
Zm00001d014187_P011	Maize	cytosol	70.83	70.48
KXG40109	Sorghum	mitochondrion	71.83	69.52
GSMUA_Achr9P11040_001	Banana	cytosol, peroxisome, vacuole	66.83	69.5
Zm00001d027811_P001	Maize	mitochondrion	71.33	66.46
GSMUA_Achr6P29710_001	Banana	endoplasmic reticulum, golgi	62.83	51.64
Bra023195.1-P	Field mustard	nucleus	16.67	27.55
Bra038426.1-P	Field mustard	plastid	16.5	25.78
Bra022326.1-P	Field mustard	mitochondrion, plastid	18.67	24.3
Bra015956.1-P	Field mustard	plastid	18.33	24.18
Bra008968.1-P	Field mustard	mitochondrion, plastid	19.67	15.59

Protein Annotations

EnsemblPlants:Bra014566.1	EnsemblPlants:Bra014566.1-P	EnsemblPlantsGene:Bra014566	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	InterPro:Zfn-C6H2	PANTHER:PTHR12121	PANTHER:PTHR12121:SF29	PFAM:PF03372	PFAM:PF15801
SEG:seg	SUPFAM:SSF56219	UniParc:UPI00025441C8	UniProt:M4DDJ8	MapMan:16.8.2.1.2.1	:

Description

AT3G58580 (E=0.0) | hydrolase

Coordinates

chrA04:+:1487232..1490892

Molecular Weight (calculated)

67065.2 Da

IEP (calculated)

7.436

GRAVY (calculated)

-0.259

Length

600 amino acids

Sequence
(BLAST)

001: MLSVIRVHLP SEIPIVGCEL TPYVLVRRPD KTAATDDVPE SAPLDGFFLR YRWYRVQSDK KVTICSVHPT EQATLQCVFC SKRRALVAKS YHCSPKCFTD
101: AWQHHKTLHE RAAAENGNEE DELTRFNSTG SGVLASTLSG SMSNLTLANN GPTPFYPSSI TQKNGGETLI EVGGCKTYTP TADDIGYVLK FECVVANAET
201: KQFVGHPSTI LTSRVIPAPS PSPRRLIPVN GADVMGHLDQ DGRIQSAGSF TVLSYNILSD TSASSDLYSY CPPWALSWPY RRQNLLREIV GYRADVVCLQ
301: EVQSDHFHEI FAPELDKHGY QALYKRKTNE VLSGSTSVID GCATFFRRDR FSHVKKYDVE FNKAAQSLTE AIIPHTQKRT ALNRLVKDNI ALIVVLEAKF
401: GNQPTDPSGK RQLICVANTH VNVQQELKDV KLWQVHTLLK GLEKIAASAD IPMLVCGDFN TLPGSAPHTL LVMGKVDPLH PDLMVDPLNI LRPHTKLTHQ
501: LPLVSAYTSF VRSVMGLGLE QHRRRMDLNT NEPLFTNCTR EFIGTHDYIF YTADTLMVES LLELLDEDGL RKDTALPSPE WSSNHIALLA EFRCMPRTRR

Best Arabidopsis Sequence Match ( AT3G58580.1 )
(BLAST)

001: MLSVIRVHLP SEIPIVGCEL TPYVLVRRPD KNSTTDDVPE SAPLEGYFLR YRWYRVQSDK KVTICSVHPT EQATLQCVFC SKRRSLVPKS YHCSPKCFTD
101: AWQHHRTLHE RAAAENNANE DDDLNRNNSA GSGSLAGSLS GSMSNLSIAN NGPAPFYPSN ITQKNGGETL VEVGGCKTYT PTADDISHVL KFECVVANAE
201: TKQIVGHPST ILTSRVIPAP SPSPRKLIPV NGADGMGHLD QDARIQSAGS FTVLSYNILS DTSASSDLYS YCPPWALSWP YRRQNLLREI VGYRADVVCL
301: QEVQSDHFHE IFAPELDKHG YQALYKRKTN EVLSGSTSAI DGCATFFRRD RFSHVKKYDV EFNKAAQSLT DALIPQAQKR TALNRLVKDN IALIVVLEAK
401: FGNQPTDPSG KRQLICVANT HVNVQQDLKD VKLWQVHTLL KGLEKIAASA DIPMLVCGDF NTLPGSAPHT LLVMGKVDPM HPDLAVDPLN ILRPHTKLTH
501: QLPLVSAYSS FVRKGIMGLG LEQHRRRIDL NTNEPLFTNC TRDFIGTHDY IFYTADTLMV ESLLELLDED GLRKDTALPS PEWSSNHIAL LAEFRCTPRT
601: RRG

Arabidopsis Description

CCR4-2Carbon catabolite repressor protein 4 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2F8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.