Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 38.87 | 34.7 |
| KRH76418 | Soybean | nucleus | 34.63 | 33.79 |
| AT1G31500.7 | Thale cress | mitochondrion | 48.41 | 32.46 |
| PGSC0003DMT400040652 | Potato | cytosol, plastid | 40.28 | 31.32 |
| KRH39729 | Soybean | plastid | 43.11 | 31.2 |
| Os05t0389500-02 | Rice | mitochondrion | 40.28 | 29.31 |
| EES19469 | Sorghum | plastid | 40.64 | 29.26 |
| Solyc08g075010.2.1 | Tomato | mitochondrion | 39.58 | 28.79 |
| TraesCS1A01G243100.1 | Wheat | mitochondrion | 39.93 | 28.54 |
| TraesCS1B01G254600.1 | Wheat | mitochondrion | 39.58 | 28.28 |
| Zm00001d038091_P006 | Maize | plastid | 40.99 | 28.22 |
| TraesCS1D01G243100.1 | Wheat | mitochondrion | 39.22 | 28.03 |
| AT1G73875.1 | Thale cress | nucleus | 23.32 | 14.54 |
| AT3G18500.3 | Thale cress | nucleus | 21.91 | 13.81 |
| AT3G58560.1 | Thale cress | cytosol | 26.5 | 12.46 |
| AT3G58580.1 | Thale cress | cytosol | 25.8 | 12.11 |
| AT5G11350.4 | Thale cress | nucleus | 22.97 | 8.61 |
Protein Annotations
| Gene3D:3.60.10.10 | MapMan:35.1 | EntrezGene:840043 | ProteinID:AAG60160.1 | ProteinID:AEE31368.1 | ArrayExpress:AT1G31530 |
| EnsemblPlantsGene:AT1G31530 | RefSeq:AT1G31530 | TAIR:AT1G31530 | RefSeq:AT1G31530-TAIR-G | EnsemblPlants:AT1G31530.1 | TAIR:AT1G31530.1 |
| InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 |
| GO:GO:0004527 | GO:GO:0005575 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR036691 | RefSeq:NP_174438.1 | PFAM:PF03372 | PANTHER:PTHR12121 |
| PANTHER:PTHR12121:SF42 | UniProt:Q9C6U7 | SUPFAM:SSF56219 | UniParc:UPI000009CDAD | SEG:seg | : |
Description
DNAse I-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6U7]
Coordinates
chr1:-:11281188..11282468
Molecular Weight (calculated)
32086.9 Da
IEP (calculated)
4.575
GRAVY (calculated)
-0.212
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSLMYVS PPESILWEKR SKAILDNIKN FEADFICLQE VDEYHSFFDR NMEAQGYSGI PIENKEGYEC AIFFKPKFAE FITYQTTRIQ GYTKYENLCV
101: APSSSTVSSE SSDVVNAEEL SVVMVAFKIL KPFNHVVIIA SSHLKSGKPD RWDDLKLAQV KTLMTELASF KEIISALTNC SPSVILAGDF NSKPYVHKYI
201: NSDNIPSDID LRSVYEFTKG EPRFTNNVPG FAETLDYMFY THSEIISPVK LLDSPDEVDF LPNEIHPSDH LPIGVEFEIN RNI
101: APSSSTVSSE SSDVVNAEEL SVVMVAFKIL KPFNHVVIIA SSHLKSGKPD RWDDLKLAQV KTLMTELASF KEIISALTNC SPSVILAGDF NSKPYVHKYI
201: NSDNIPSDID LRSVYEFTKG EPRFTNNVPG FAETLDYMFY THSEIISPVK LLDSPDEVDF LPNEIHPSDH LPIGVEFEIN RNI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.