Factsheet for Zm00001d038091_P006

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19469	Sorghum	plastid	88.08	92.11
Os05t0389500-02	Rice	mitochondrion	75.91	80.21
TraesCS1D01G243100.1	Wheat	mitochondrion	72.99	75.76
TraesCS1B01G254600.1	Wheat	mitochondrion	72.99	75.76
TraesCS1A01G243100.1	Wheat	mitochondrion	72.51	75.25
GSMUA_AchrUn_...	Banana	cytosol	49.39	64.04
PGSC0003DMT400040652	Potato	cytosol, plastid	49.39	55.77
Bra023195.1-P	Field mustard	nucleus	48.66	55.1
KRH76418	Soybean	nucleus	38.69	54.83
VIT_02s0087g00390.t01	Wine grape	mitochondrion	51.58	53.94
KRH39729	Soybean	plastid	50.61	53.2
CDY12415	Canola	plastid	47.69	52.69
Bra038426.1-P	Field mustard	plastid	49.15	52.6
CDY12304	Canola	plastid	50.85	52.25
CDY27147	Canola	plastid	48.91	52.07
Solyc08g075010.2.1	Tomato	mitochondrion	49.15	51.93
AT1G31500.7	Thale cress	mitochondrion	50.61	49.29
CDY62302	Canola	mitochondrion, plastid	51.09	48.84
AT1G31530.1	Thale cress	cytosol	28.22	40.99
Zm00001d045673_P003	Maize	plastid	22.63	20.99
Zm00001d032979_P003	Maize	cytosol	24.09	16.36
Zm00001d014187_P011	Maize	cytosol	23.84	16.25
Zm00001d027811_P001	Maize	mitochondrion	25.06	15.99
Zm00001d044447_P007	Maize	mitochondrion	16.06	11.54

Protein Annotations

EnsemblPlants:Zm00001d038091_P006	EnsemblPlants:Zm00001d038091_T006	EnsemblPlantsGene:Zm00001d038091	Gene3D:3.60.10.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF42
PFAM:PF03372	ProteinID:AQK85599.1	SUPFAM:SSF56219	UniParc:UPI00084305DC	UniProt:A0A1D6M341	MapMan:35.1

Description

Carbon catabolite repressor protein 4 homolog 4

Coordinates

chr6:-:147431413..147441598

Molecular Weight (calculated)

45816.4 Da

IEP (calculated)

8.171

GRAVY (calculated)

-0.416

Length

411 amino acids

Sequence
(BLAST)

001: MIIITNNSPQ RAPPMLKPQT SWTASLPLLL IRRCSRTAAS PSPAGDRPLS FVPVCKRRMS TLAHPRFAPL PTEQTESQTD GGAARYQFRL VSYNILAQVY
101: VKSTLFPHSP SACLKWKSRS GAILTELKSF DADFMCIQEL DEYDTFYKKN MENSGYSSIY IQRSGDKRDG CGIFYKPKSA ELVQKEVILY NDLVEKYVPS
201: DNVNSALENN SSAEEDKNAK PDNSKRGDPN DPRVRLKRDC VGLLAAFKLS DPCDQILIVA NTHIYWDPQW IDVKLAQAKY LLSRVSQFEQ LISNKYNCKP
301: SVIIAGDFNS TPGDKVYNYL LSANLGSTDE APIKLRSLYA ANGGEPEYTN YTPGFTGTLD YIFLSDGSSI KPTSLLRLPR GDSEDVKGGL PNFRHPSDHL
401: PIGADFLVVN I

Best Arabidopsis Sequence Match ( AT1G31500.5 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPRK VISRRMSTNP AIEPKVRKFE SVEGVDIGSR NKSDGIRFRL VSYNILAQVY VKSALLPHSP PACLKWKARS HAILSVLKNL
101: QADFFCLQEV DEYDSFYRNN MDSLGYSGIY IQRTGQRKRD GCAIFYKPSC AELVTKERIE YNDLVDSIKA DSVSCSEQKI ETSNEGKDSR KDSRDLNDPL
201: VRLKRDCVGI MAAFRINKPF QHIVIVANTH LYWDPELADV KLAQAKYLLS RLAQFKTLIS DEFECTPSLL LAGDFNSIPG DMVYSYLVSG NAKPTETIEE
301: EEAPVPLSSV YEVTRGEPKF TNCTPGFTNT LDYIFISPSD FIKPVSILQL PEPDSPDVVG FLPNHHHPSD HLPIGAEFEI RRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.