Factsheet for Solyc08g075010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040652	Potato	cytosol, plastid	87.92	93.96
VIT_02s0087g00390.t01	Wine grape	mitochondrion	64.27	63.61
KRH39729	Soybean	plastid	59.9	59.59
KRH76418	Soybean	nucleus	43.96	58.97
Bra023195.1-P	Field mustard	nucleus	55.01	58.95
GSMUA_AchrUn_...	Banana	cytosol	47.04	57.73
Bra038426.1-P	Field mustard	plastid	56.04	56.77
CDY12415	Canola	plastid	54.24	56.72
CDY27147	Canola	plastid	56.04	56.48
CDY12304	Canola	plastid	56.04	54.5
AT1G31500.7	Thale cress	mitochondrion	57.07	52.61
EES19469	Sorghum	plastid	51.93	51.4
Os05t0389500-02	Rice	mitochondrion	51.16	51.16
CDY62302	Canola	mitochondrion, plastid	56.3	50.93
TraesCS1D01G243100.1	Wheat	mitochondrion	51.67	50.76
TraesCS1B01G254600.1	Wheat	mitochondrion	51.41	50.51
TraesCS1A01G243100.1	Wheat	mitochondrion	51.41	50.51
Zm00001d038091_P006	Maize	plastid	51.93	49.15
AT1G31530.1	Thale cress	cytosol	28.79	39.58
Solyc03g119710.2.1	Tomato	plastid	23.65	21.2
Solyc03g119570.1.1	Tomato	nucleus	22.62	21.05
Solyc03g059010.2.1	Tomato	cytosol, nucleus, plastid	25.71	16.84
Solyc10g078950.1.1	Tomato	cytosol	23.65	16.4
Solyc08g067420.2.1	Tomato	plastid	24.94	11.11

Protein Annotations

EnsemblPlants:Solyc08g075010.2.1	EnsemblPlantsGene:Solyc08g075010.2	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691	PANTHER:PTHR12121
PANTHER:PTHR12121:SF42	PFAM:PF03372	SUPFAM:SSF56219	UniParc:UPI000276B4E0	UniProt:K4CML9	MapMan:35.1

Description

No Description!

Coordinates

chr8:-:59147651..59158720

Molecular Weight (calculated)

43078.1 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.288

Length

389 amino acids

Sequence
(BLAST)

001: MLKSSFFLLP RFPLASTPHR TIHFAKMSTT PAPLSPKFVP AEKSGITSVS KSDGFKFSLV SYNILAQAYV KGDLFSHSPR PCLKWKARSQ AILTVLKSLG
101: ADFLCLQELD EYDSFYKGNI ESVGYSSIYV KRNGQKRDGC GIFYKPDSAE LLIKEKVEYN DLVPSNQDDT SSEDKEENLP AGGNKKLASK DAGLKNKRAG
201: HGDLNDPCVR FKRDCVGIMA AFRLKDPSHF IIVANTHIYW DPELADVKLA QARYLLSRLA QFKLLVSDKF DCSPSVVVTG DFNSLPGSQV YQYLTSGSSE
301: AGTLLEISDD VHIPLCSAYA STRGEPHFTN YTPGFTGTLD YILFSPENIK PVSYLELPEP EASDIQGGLP NYYHPSDHLP IGAEFEIIQ

Best Arabidopsis Sequence Match ( AT1G31500.5 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPRK VISRRMSTNP AIEPKVRKFE SVEGVDIGSR NKSDGIRFRL VSYNILAQVY VKSALLPHSP PACLKWKARS HAILSVLKNL
101: QADFFCLQEV DEYDSFYRNN MDSLGYSGIY IQRTGQRKRD GCAIFYKPSC AELVTKERIE YNDLVDSIKA DSVSCSEQKI ETSNEGKDSR KDSRDLNDPL
201: VRLKRDCVGI MAAFRINKPF QHIVIVANTH LYWDPELADV KLAQAKYLLS RLAQFKTLIS DEFECTPSLL LAGDFNSIPG DMVYSYLVSG NAKPTETIEE
301: EEAPVPLSSV YEVTRGEPKF TNCTPGFTNT LDYIFISPSD FIKPVSILQL PEPDSPDVVG FLPNHHHPSD HLPIGAEFEI RRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.