Factsheet for Os05t0389500-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G243100.1	Wheat	mitochondrion	82.78	81.31
EES19469	Sorghum	plastid	81.23	80.41
TraesCS1A01G243100.1	Wheat	mitochondrion	81.75	80.3
TraesCS1B01G254600.1	Wheat	mitochondrion	81.49	80.05
Zm00001d038091_P006	Maize	plastid	80.21	75.91
GSMUA_AchrUn_...	Banana	cytosol	51.93	63.72
Bra023195.1-P	Field mustard	nucleus	51.16	54.82
PGSC0003DMT400040652	Potato	cytosol, plastid	50.9	54.4
VIT_02s0087g00390.t01	Wine grape	mitochondrion	54.24	53.69
Bra038426.1-P	Field mustard	plastid	52.19	52.86
CDY27147	Canola	plastid	52.19	52.59
CDY12415	Canola	plastid	50.13	52.42
CDY12304	Canola	plastid	52.96	51.5
KRH76418	Soybean	nucleus	38.3	51.38
Solyc08g075010.2.1	Tomato	mitochondrion	51.16	51.16
KRH39729	Soybean	plastid	50.64	50.38
AT1G31500.7	Thale cress	mitochondrion	52.7	48.58
CDY62302	Canola	mitochondrion, plastid	53.47	48.37
AT1G31530.1	Thale cress	cytosol	29.31	40.28
Os06t0264900-00	Rice	plastid	15.94	20.26
Os10t0412100-01	Rice	cytosol	24.68	15.87
Os03t0166800-01	Rice	cytosol	24.68	15.82
Os01t0610600-01	Rice	mitochondrion	21.34	9.19

Protein Annotations

EMBL:AK060960	EMBL:AK098939	EMBL:AK104776	EnsemblPlants:Os05t0389500-02	EnsemblPlantsGene:Os05g0389500	EntrezGene:4338672
Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF42
PFAM:PF03372	ProteinID:AAT47439.1	ProteinID:BAF17348.1	ProteinID:BAS93833.1	ProteinID:EEE63592.1	RefSeq:XP_015640179.1
SEG:seg	SUPFAM:SSF56219	UniParc:UPI00003B0D44	UniProt:Q6I5Y3	MapMan:35.1	:

Description

Endonuclease/exonuclease/phosphatase domain containing protein. (Os05t0389500-01);Endonuclease/exonuclease/phosphatase domain containing protein. (Os05t0389500-02);Similar to Hydrolase. (Os05t0389500-03)

Coordinates

chr5:-:18845942..18849913

Molecular Weight (calculated)

43410.4 Da

IEP (calculated)

7.494

GRAVY (calculated)

-0.459

Length

389 amino acids

Sequence
(BLAST)

001: MLKLQASLPL FRLRPRPSSP PPCGPRLPFV PICKRRMSTQ AQPSFAPLPT AQSESDAGAA GYQFRLVSYN ILAQVYVKSA FFPHSPSACL KWKTRSKAVL
101: SELKSFEADL MCIQELDEYD TFYKKNMENS GYSSIYIQRS GDKRDGCGIF YKPKSMELVQ KEVLHYNDLV EKYVHTDHVN SDTSNNSSPT EEASKKVDNN
201: KHGDPNDPRF RLKRDCVGLL AAFKLNDPCD HILIMANTHI YWDPEWIDVK LAQAKYILSR VTQFEKLISN KFNCKPSVMI AGDFNSTPGD KVYNYLVSAN
301: SDSTDEAPIK LRSLYAANGG EPEFTNCTPG FTGTLDYIFL SDGSSVKPTS LLRIPRGDSA EVQGGLPNFH HPSDHLPIGA DFQVLGSEG

Best Arabidopsis Sequence Match ( AT1G31500.1 )
(BLAST)

001: MFSSTTLHHL PRPNLLLPSS RVCRKVISRR MSTNPAIEPK VRKFESVEGV DIGSRNKSDG IRFRLVSYNI LAQVYVKSAL LPHSPPACLK WKARSHAILS
101: VLKNLQADFF CLQEVDEYDS FYRNNMDSLG YSGIYIQRTG QRKRDGCAIF YKPSCAELVT KERIEYNDLV DSIKADSVSC SEQKIETSNE GKDSRKDSRD
201: LNDPLVRLKR DCVGIMAAFR INKPFQHIVI VANTHLYWDP ELADVKLAQA KYLLSRLAQF KTLISDEFEC TPSLLLAGDF NSIPGDMVYS YLVSGNAKPT
301: ETIEEEEAPV PLSSVYEVTR GEPKFTNCTP GFTNTLDYIF ISPSDFIKPV SILQLPEPDS PDVVGFLPNH HHPSDHLPIG AEFEIRRE

Arabidopsis Description

DNAse I-like superfamily protein [Source:TAIR;Acc:AT1G31500]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.