Factsheet for HORVU0Hr1G020140.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G209700.2	Wheat	plastid	85.22	87.7
TraesCS7A01G206900.2	Wheat	plastid	85.0	87.47
HORVU7Hr1G042150.3	Barley	nucleus, plastid	91.74	86.12
TraesCS7B01G114200.1	Wheat	plastid	81.74	84.3
Os06t0264900-00	Rice	plastid	46.96	70.59
Zm00001d045673_P003	Maize	plastid	67.17	69.75
EER89572	Sorghum	plastid	69.78	68.59
GSMUA_Achr7P12580_001	Banana	mitochondrion	37.39	53.42
VIT_17s0000g04030.t01	Wine grape	plastid	41.96	43.76
KRH41616	Soybean	cytosol	33.48	41.96
KRH60320	Soybean	plastid	39.35	41.61
Solyc03g119710.2.1	Tomato	plastid	38.7	41.01
CDX92241	Canola	mitochondrion, nucleus, plastid	39.57	40.44
CDY24484	Canola	mitochondrion	39.35	40.22
AT3G18500.3	Thale cress	nucleus	38.7	39.64
Bra022326.1-P	Field mustard	mitochondrion, plastid	38.04	37.96
HORVU1Hr1G035390.1	Barley	cytosol	22.61	17.19

Protein Annotations

EnsemblPlants:HORVU0Hr1G020140.2	EnsemblPlantsGene:HORVU0Hr1G020140	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPR036691
PANTHER:PTHR12121	PANTHER:PTHR12121:SF48	PFAM:PF03372	SEG:seg	SUPFAM:SSF56219	UniParc:UPI000B46303D
UniProt:A0A287E5T6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:105685588..105689090

Molecular Weight (calculated)

48237.2 Da

IEP (calculated)

6.068

GRAVY (calculated)

-0.573

Length

460 amino acids

Sequence
(BLAST)

001: GRRPAREGXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXAPFDHRRR WQNPAGASGR VWQGYRAPHT PVPSRQWVFA DEASTSGSDA CTIMSYNILA
101: DNNARNHPDL YLDVPWDALR WDSRRRLIIH EIRHWDSDLV CLQEVDRFRE IAAEMKNKGY ECSFKGRTGD AKDGCATFWK SERLRLLEED SIDFSEFNLR
201: NNVAQVLVFE LNGTQKFVLG NIHVLFNPKR GDVKMGQIRM LLERANALAG KWDGIPIVLA GDFNSTPESA IYKFLSTMKL NVSLHDRRQL SGLDSSEFGL
301: YCSLLNFEWS DEEVRNATGS SNVMVARHPL KLSSSYAMLK GNSSNRGHHG EPLATSYHKK FLGTVDYLWY TPGLECSRVL DTLPVDALKR TRGLPTREMG
401: SDHLPIVAEF IFSEQTRYSS EQGDESDQDE SEPDDEPTRE ATTAKHIYFS SDSDSSADAS

Best Arabidopsis Sequence Match ( AT3G18500.3 )
(BLAST)

001: MRCVNRVDCS WSRPSEAYRI LPSGGHLSSG FHQCPLSSLS FRSSFVCCSS STSGPSDSNP ESSSNRSYSR RWQNPLPRRQ HPDQIPSSQI ARDWIDSDTT
101: PVSQALERFT VVSYNILGDG NSSYHRELYS NVSVPYLKWG YRKRLICEEL IRLNPDIISM QEVDKYFDLF SMMEKAGYAG SYKRRTGDNV DGCAMFWKAD
201: RFGVLERENI EFSQFGMRDN VAQLAVLELR KSNKSRKILL GNIHVLYNPN QGDVKLGQVR SLCSKAHLLS KKWGDIPIVL CGDFNSTPKS PLYNFLASSE
301: LNVMEHDKKE LSGQKNCRPT KVLETGSKSS NTITFRSFCS SWTKEEIRVA TGQENSYWAA HPLKLNSSYA SVKGSANTRD SVGEPLATSY HSKFLGTVDY
401: LWYSDGLLPA RVLDTLPIDV LCKTKGLPCQ ELGSDHLALV SEFVFEPDG

Arabidopsis Description

DNAse I-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J8R6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.