CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39200	Soybean	nucleus, plastid	90.59	60.75
VIT_17s0000g03760.t01	Wine grape	nucleus	68.64	42.55
Solyc03g119570.1.1	Tomato	nucleus	60.98	41.87
CDX96494	Canola	plastid	63.41	41.27
AT1G73875.1	Thale cress	nucleus	65.16	41.19
CDX73024	Canola	plastid	63.76	40.31
Bra015956.1-P	Field mustard	plastid	62.72	39.56
PGSC0003DMT400014627	Potato	nucleus	56.79	36.71
GSMUA_Achr6P09650_001	Banana	nucleus	57.14	34.75
KRH41616	Soybean	cytosol	43.9	34.33
KRH71803	Soybean	cytosol	20.56	32.07
KRH60320	Soybean	plastid	48.08	31.72
KRH76418	Soybean	nucleus	20.56	20.34
KRH39729	Soybean	plastid	26.48	19.44
KRG96349	Soybean	cytosol	31.01	14.83
KRH16019	Soybean	plastid	43.55	14.67
KRH38033	Soybean	cytosol	30.31	14.5
KRH68083	Soybean	cytosol	30.31	14.45
KRH05096	Soybean	cytosol	20.21	11.37
KRH71804	Soybean	cytosol	9.41	7.05

Protein Annotations

EMBL:ACUP02004241	EnsemblPlants:KRH48475	EnsemblPlantsGene:GLYMA_07G091200	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
InterPro:IPR036691	PANTHER:PTHR12121	PANTHER:PTHR12121:SF51	PFAM:PF03372	ProteinID:KRH48475	ProteinID:KRH48475.1
SUPFAM:SSF56219	UniParc:UPI0006EDBA70	UniProt:A0A0R0J8S6	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr7:-:8530094..8534366

Molecular Weight (calculated)

32815.2 Da

IEP (calculated)

6.901

GRAVY (calculated)

-0.229

Length

287 amino acids

Sequence
(BLAST)

001: MKIILCLPHI YYFEQFHPDL YSNIPHSFLE WERWKRLILE EINNYNASIL CFQEVVHFND LDDLFQNSGF KGVYKARTGE ALDGCAVFWK DNLAPSTGKR
101: RFVVGNIHVL FNPNRGDIKL GQVRLLLDKA YKLSQEWGDI PVIIAGDLNS VPQVCAIYKF LSSSKLDIQL HDRRKIWSVE ELRLASGEEG VTRLQHQLKL
201: CSAYSGVPGN HRTRDDIGEP LATSYHSKFM GTVDYIWHSE DLIPVRVLET LPIDTLRRSR GLPSEKWGSD HLAVVCEVAF ANNGNVS

Best Arabidopsis Sequence Match ( AT1G73875.1 )
(BLAST)

001: MSGYERKNTT ANSITITKRK RNSISEQSEN VYEKSNRKES ITLKPHRSFT PGFSQRDCKP VRHSKSSLRR RRRTKEKISS SVEREWVFSA NNFENLADKL
101: VLVSYNLLGV DNASNHMDLY YNVPRKHLEW SRRKHLICKE ISRYNASILC LQEVDRFDDL DVLLKNRGFR GVHKSRTGEA SDGCAIFWKE NLFELLDHQH
201: IEFDKFGMRN NVAQLCVLEM NCEEDPKSKL RVRSSDPRRL VVGNIHVLFN PKRGDIKLGQ VRLFLEKAYK LSQEWGNIPV AIAGDLNSTP QSAIYDFIAS
301: ADLDTQLHDR RQISGQTEVE PKERSFRNHY AFSASASISG SLLNEWSQEE LQLATGGQET THVQHQLKLN SAYSGVPGTY RTRDQRGEPL ATTYHSRFLG
401: TVDYIWHTKE LVPVRVLETL PADVLRRTGG LPSENWGSDH LAIACELGFV NDWQ

Arabidopsis Description

CCR4-5Carbon catabolite repressor protein 4 homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WKY2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.