Factsheet for GSMUA_Achr8P00910_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	54.36	57.82
GSMUA_Achr6P12010_001	Banana	cytosol	50.62	55.77
GSMUA_Achr3P02500_001	Banana	cytosol, plastid	53.12	55.61
GSMUA_Achr8P16490_001	Banana	cytosol	54.11	48.87
GSMUA_Achr11P...	Banana	cytosol	30.42	42.51
GSMUA_Achr4P00640_001	Banana	cytosol	39.4	40.83
GSMUA_Achr9P01610_001	Banana	cytosol	38.65	39.74
GSMUA_Achr8P17510_001	Banana	cytosol	15.21	39.61
GSMUA_Achr8P17520_001	Banana	cytosol	15.21	37.42
GSMUA_Achr8P17500_001	Banana	cytosol	28.93	33.72
GSMUA_Achr11P...	Banana	cytosol	28.93	24.58
GSMUA_Achr2P10150_001	Banana	cytosol	27.18	24.22
GSMUA_Achr4P30210_001	Banana	cytosol	26.93	24.05
GSMUA_Achr1P24520_001	Banana	nucleus	39.4	15.99

Protein Annotations

MapMan:16.9.1	Gene3D:3.10.450.50	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	EnsemblPlantsGene:GSMUA_Achr8G00910_001	EnsemblPlants:GSMUA_Achr8P00910_001	EnsemblPlants:GSMUA_Achr8T00910_001	InterPro:IPR000504	InterPro:IPR012677
InterPro:IPR018222	UniProt:M0TLJ3	InterPro:NTF2	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFAM:PF02136	PFscan:PS50102	PFscan:PS50177	PANTHER:PTHR10693	PANTHER:PTHR10693:SF27
InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54427	SUPFAM:SSF54928	UniParc:UPI000295AFE0
SEG:seg	:	:	:	:	:

Description

Putative G3BP-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G00910_001]

Coordinates

chr8:+:757983..770221

Molecular Weight (calculated)

43393.5 Da

IEP (calculated)

4.197

GRAVY (calculated)

-0.390

Length

401 amino acids

Sequence
(BLAST)

001: MASEQSAPVG SSHPAQVVGN AFVNQYYHVL HRSPQLVFRF YQEASKLGRP DPQAEMSSVT GMDAINEKIL SVDYSEFRAE IKTVDAQESL DGGIVVLVTG
101: YLTGKDDVKR NFTQSFFLAT QDKGYYVLND IFRYVDDGND QWESGALTSG DRAPLAPEQG IDGTLEQQQE APPKQDQQVT EAPEEVELNE EEVFNSPEIE
201: DAPTLEEEAP TIEMIDEVAK ISQTVVADSG SAAILEGAPK KSYASIVKVM KENAPPSVPA PVPSRSAVVD IDQLASPVPT PAPAPNNTSA GSTAGESNST
301: QESEVDGYSI YIKNLPLNAT PAQLDEEFKK FGPIKPGGIQ VRSHKQQGFC FGFVEFEVAS AVQCAIEASP IMIGGRQAFV EEKRPNSSRG KLNGSCYVMF
401: I

Best Arabidopsis Sequence Match ( AT3G25150.2 )
(BLAST)

001: MNFSVLLYIN SKATFFSSSS IFLFSRRSLF FSRFSCKTLT SAIAKEAFLR SSLRNFPVNR QLRLFQFLDR FFITSICAYL LRESSSHLAF ELDTDTHTAM
101: AMLGAQQVPA AACTPDMVGN AFVPQYYHIL HQSPEHVHRF YQEISKLGRP EENGLMSITS TLQAIDKKIM ALGYGVISAE IATVDTQESH GGGYIVLVTG
201: YLTGKDSVRR TFSQTFFLAP QETGYFVLND MFRFIDEGTV VHGNQIPVNN VQAPVNTYQD TAAAKEIPDD FVQEKYVQEN HAVKQTEVLS KSINEPEKVF
301: TPSEDEQVSA AEEALVTETV NEAPIEVQKV GESDSRTGEI PKRSYASIVK VMKENAAPMS ASRTPTKVEP KKQEDQAIHI PLPTPLSEKS DSGANVAVNE
401: NNQENERALG PSIYLKGLPL DATPALLENE FQKFGLIRTN GIQVRSQKGF CFGFVEFESA SSMQSAIEAS PVMLNGHKVV VEEKRSTARG NYRGRSTFGV
501: NTGYRNEGGR GRGSFGGGRG GYGRTDFNGY GNNRGNNRGG YANRANGDGG GFPRANGNNG RVRRGGGNDA NRATKPVDDA PRVSVAA

Arabidopsis Description

Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J8X6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.