Factsheet for GSMUA_Achr4P00640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g083060.1.1	Tomato	cytosol	11.11	51.19
TraesCS7D01G414000.1	Wheat	cytosol	19.38	47.17
TraesCS7A01G421800.1	Wheat	cytosol	19.12	46.25
TraesCS7B01G322100.1	Wheat	cytosol	18.86	45.91
GSMUA_Achr3P02500_001	Banana	cytosol, plastid	43.15	43.6
GSMUA_Achr10P...	Banana	cytosol	41.34	42.44
KRH45051	Soybean	cytosol	49.35	41.34
GSMUA_Achr6P12010_001	Banana	cytosol	38.5	40.93
GSMUA_Achr8P00910_001	Banana	cytosol, plastid	40.83	39.4
Solyc02g030530.1.1	Tomato	cytosol	28.68	38.95
KRH03143	Soybean	cytosol, nucleus	45.99	38.7
KRH56802	Soybean	cytosol, nucleus	45.48	38.1
KRH01288	Soybean	cytosol	46.51	37.82
VIT_17s0000g05240.t01	Wine grape	golgi, mitochondrion	48.84	37.8
GSMUA_Achr8P17520_001	Banana	cytosol	15.76	37.42
Bra012989.1-P	Field mustard	cytosol	42.89	36.89
GSMUA_Achr8P17510_001	Banana	cytosol	14.47	36.36
AT5G60980.3	Thale cress	cytosol	43.15	36.3
KXG39124	Sorghum	cytosol	14.99	36.25
Bra029343.1-P	Field mustard	cytosol	41.86	36.08
CDY42844	Canola	cytosol	41.34	35.96
CDY16827	Canola	cytosol	41.86	35.68
Bra035946.1-P	Field mustard	cytosol	41.86	35.68
GSMUA_Achr8P16490_001	Banana	cytosol	40.83	35.59
CDY47006	Canola	cytosol	39.79	35.57
VIT_01s0011g00400.t01	Wine grape	cytosol	44.44	35.54
Solyc02g032790.1.1	Tomato	cytosol	27.39	35.1
GSMUA_Achr9P01610_001	Banana	cytosol	35.14	34.87
VIT_14s0068g00310.t01	Wine grape	cytosol	47.55	34.78
CDY23092	Canola	mitochondrion	42.12	34.61
KRH57274	Soybean	cytosol, mitochondrion	18.86	33.95
Solyc02g088920.2.1	Tomato	cytosol	34.37	33.67
PGSC0003DMT400003713	Potato	cytosol	42.89	33.6
CDY02179	Canola	plastid	43.15	33.13
HORVU0Hr1G007150.3	Barley	cytosol	23.77	32.97
GSMUA_Achr11P...	Banana	cytosol	24.29	32.75
Os03t0418800-01	Rice	mitochondrion	44.19	32.7
Solyc02g066830.2.1	Tomato	cytosol	33.07	32.08
GSMUA_Achr8P17500_001	Banana	cytosol	28.17	31.69
Solyc02g030490.1.1	Tomato	cytosol	19.64	30.89
CDX87195	Canola	plastid	41.09	30.58
GSMUA_Achr1P24520_001	Banana	nucleus	77.52	30.36
HORVU3Hr1G089630.1	Barley	cytosol	42.12	30.02
Zm00001d047289_P003	Maize	plasma membrane	45.22	29.97
TraesCS3D01G392700.1	Wheat	cytosol, nucleus, plastid	41.86	29.72
TraesCS3B01G431000.2	Wheat	cytosol	41.86	29.62
TraesCS3A01G398600.1	Wheat	cytosol	41.6	29.38
Os07t0603100-01	Rice	extracellular	40.57	27.59
EER94684	Sorghum	cytosol	43.93	27.42
Zm00001d022071_P002	Maize	cytosol	38.24	25.26
GSMUA_Achr4P30210_001	Banana	cytosol	28.42	24.5
GSMUA_Achr11P...	Banana	cytosol	29.72	24.36
TraesCS2A01G176100.1	Wheat	cytosol, nucleus, plastid	39.53	24.29
TraesCS2D01G183500.1	Wheat	cytosol	39.53	24.29
TraesCS2B01G202200.1	Wheat	cytosol	39.28	24.24
HORVU2Hr1G032730.1	Barley	cytosol, nucleus, peroxisome	39.02	24.24
GSMUA_Achr2P10150_001	Banana	cytosol	27.39	23.56
OQU90215	Sorghum	cytosol	39.02	19.51

Protein Annotations

MapMan:16.9.1	Gene3D:3.10.450.50	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	EnsemblPlantsGene:GSMUA_Achr4G00640_001	EnsemblPlants:GSMUA_Achr4P00640_001	EnsemblPlants:GSMUA_Achr4T00640_001	InterPro:IPR000504	InterPro:IPR012677
InterPro:IPR018222	UniProt:M0SJY1	InterPro:NTF2	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFAM:PF02136	PFscan:PS50102	PFscan:PS50177	PANTHER:PTHR10693	PANTHER:PTHR10693:SF27
InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54427	SUPFAM:SSF54928	UniParc:UPI000294D39F
SEG:seg	:	:	:	:	:

Description

Putative G3BP-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G00640_001]

Coordinates

chr4:-:528200..533610

Molecular Weight (calculated)

42662.0 Da

IEP (calculated)

4.531

GRAVY (calculated)

-0.407

Length

387 amino acids

Sequence
(BLAST)

001: MALPTASPVS PLSPQVIGNA FVQQYYQILH QSPEMVHKFY QDSSIVNRPN SDGEMTSVTT MQAINEKIMS LDFRNCFTEI KTIDSQLSYQ NGVLIVVTGS
101: FIGQENVKSK FAQSFFLAPQ ENGGYFVLND VFRFLSETQP REMNHFLSDG TNDDALKAPL TSDTEQNLQE YHDVETLQTE EDGDNMEDVL NQSEDGGSGV
201: EDEVVVDLPA NASEIDSQTT HEVIASGAQD DVPKKSYASI VKVMKGSPSP ALVHVTPKAK VAAEKPVVVS PTPATVPETS VPAINDVPEN KNNVEEEGHS
301: IYIRNLSPNA TAEKVEEEFK KFGPIKPGGV QVRSHKVERY CFGFVEFESL KSMQAAIEAS PITIGGRQAI VQEKRTTTRG KYRLFFI

Best Arabidopsis Sequence Match ( AT5G60980.2 )
(BLAST)

001: MAQQEASPSP GAEVVGRAFV EQYYHILHQS PGLVHRFYQD SSFLTRPDVT GAVTTVTTMQ AINDKILSLK YEDYTAEIET ADAQESHERG VIVLVTGRLT
101: GNDNVRKKFS QSFFLAPQDK GYFVLNDVFR FLEEKEVTAQ ARSVPINGTT RDVQAPIEPE RVVVSHEPEV EPEPVASIEE EDLDNVAEVY DPSDKDEGVV
201: VDVEPIEPPT QISHNEILSV PQGDAPKHSY ASILKQMKSS PAPTTHVARN KPRPAPVNQK LTAPPAEPAA RPEASAHENV PNSSHVDVED DGHSIYVRNL
301: PFDSTPTQLE EVFKNFGAIK HEGIQVRSNK QQGFCFGFVE FETSSGKQSA LEASPVTIGD RQAVVEEKKT NSRGGGNNGG SRGRYFSGRG SFRNESFKGG
401: RGGGGRGGYG RGGGEFSGRP KSSNPRNGGE GYQRVPQNGG GGRGGRGEGG RGGARGGGSS

Arabidopsis Description

AT5g60980/MSL3_100 [Source:UniProtKB/TrEMBL;Acc:Q9FME2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.