Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G414000.1 | Wheat | cytosol | 94.34 | 94.34 |
| TraesCS7A01G421800.1 | Wheat | cytosol | 84.28 | 83.75 |
| Solyc10g083060.1.1 | Tomato | cytosol | 17.61 | 33.33 |
| GSMUA_Achr4P00640_001 | Banana | cytosol | 45.91 | 18.86 |
| TraesCS2B01G202200.1 | Wheat | cytosol | 64.15 | 16.27 |
| KRH45051 | Soybean | cytosol | 42.77 | 14.72 |
| KRH03143 | Soybean | cytosol, nucleus | 41.51 | 14.35 |
| CDY47006 | Canola | cytosol | 38.99 | 14.32 |
| KRH56802 | Soybean | cytosol, nucleus | 41.51 | 14.29 |
| KRH01288 | Soybean | cytosol | 42.77 | 14.29 |
| Os07t0603100-01 | Rice | extracellular | 50.94 | 14.24 |
| Bra012989.1-P | Field mustard | cytosol | 40.25 | 14.22 |
| CDY16827 | Canola | cytosol | 40.25 | 14.1 |
| Bra035946.1-P | Field mustard | cytosol | 40.25 | 14.1 |
| VIT_01s0011g00400.t01 | Wine grape | cytosol | 42.77 | 14.05 |
| PGSC0003DMT400003713 | Potato | cytosol | 43.4 | 13.97 |
| CDY42844 | Canola | cytosol | 38.99 | 13.93 |
| AT5G60980.3 | Thale cress | cytosol | 40.25 | 13.91 |
| Bra029343.1-P | Field mustard | cytosol | 38.99 | 13.81 |
| CDY23092 | Canola | mitochondrion | 39.62 | 13.38 |
| VIT_17s0000g05240.t01 | Wine grape | golgi, mitochondrion | 40.88 | 13.0 |
| TraesCS2B01G295400.1 | Wheat | plastid | 39.62 | 12.94 |
| VIT_14s0068g00310.t01 | Wine grape | cytosol | 42.77 | 12.85 |
| CDY02179 | Canola | plastid | 40.25 | 12.7 |
| TraesCS3B01G431000.2 | Wheat | cytosol | 42.77 | 12.43 |
| CDX87195 | Canola | plastid | 39.62 | 12.12 |
| Zm00001d022071_P002 | Maize | cytosol | 44.03 | 11.95 |
| KRH57274 | Soybean | cytosol, mitochondrion | 15.72 | 11.63 |
| Solyc02g032790.1.1 | Tomato | cytosol | 21.38 | 11.26 |
| Solyc02g030530.1.1 | Tomato | cytosol | 20.13 | 11.23 |
| Solyc02g088920.2.1 | Tomato | cytosol | 27.04 | 10.89 |
| Solyc02g030490.1.1 | Tomato | cytosol | 15.72 | 10.16 |
| TraesCS7B01G179500.1 | Wheat | nucleus | 27.04 | 9.89 |
| OQU90215 | Sorghum | cytosol | 44.03 | 9.04 |
| Solyc02g066830.2.1 | Tomato | cytosol | 22.64 | 9.02 |
| GSMUA_Achr1P24520_001 | Banana | nucleus | 47.17 | 7.59 |
| TraesCS2B01G384400.1 | Wheat | cytosol | 20.75 | 7.37 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G322100.1 | EnsemblPlantsGene:TraesCS7B01G322100 | Gene3D:3.10.450.50 | InterPro:IPR018222 | InterPro:NTF2 | InterPro:NTF2-like_dom_sf |
| InterPro:Nuclear_transport_factor_2_euk | PANTHER:PTHR10693 | PANTHER:PTHR10693:SF26 | PFAM:PF02136 | PFscan:PS50177 | SEG:seg |
| SUPFAM:SSF54427 | TIGR:cd00780 | MapMan:16.9.1 | : | : | : |
Description
No Description!
Coordinates
chr7B:-:572650901..572651927
Molecular Weight (calculated)
17775.2 Da
IEP (calculated)
7.232
GRAVY (calculated)
-0.289
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKQAGNSVG GVLPHPHVIG NAFAQHYYKI LNESPEDVHK FYHDDSILGR KPNSDGKLTS ITTMRDIKKH FVSTYLKGCS MQIDNVDSQP SHEGGVLVLV
101: SGSFTVPDAM NRRFTQSFFL APQKGGYFVL NDVLRYIPVE PETPPVKVPE PPLIDYFWV
101: SGSFTVPDAM NRRFTQSFFL APQKGGYFVL NDVLRYIPVE PETPPVKVPE PPLIDYFWV
001: MALESNAPVV DPNTIGNSFV EKYYNLLYKS PSQVHQFYLD DSVLGRPGSD GEMVSVKSLK AINEQIMSFD YEISKIQILT ADSQASYMNG VVTLVTGLLT
101: VKEGQRMRFS QSFFLVPLNG SYFVLNDVFR YVADEIVEPE ANKKEVEEVI PQVVQPTEQV DEVAEPVTIP TQQPEAKQTT ENTVKKPERA VANGHPKTQE
201: DNVVNDKSNG VDAPKKSFAH IVQDLAQNGA TFNAKASPAK PKSKPVTKPS AARESKAPAP VSEHSSAATI DQQAEGYTIF VANLLMDATP EQLNETFKGF
301: GAITKDGIQV RSYRLKGNCF GFVTFASAEA VKLVLQAHKE SAIRIGNRRV SIEEKRGNND NGRPAMRNGG YRNDNGYRND GYRPRGNGSN GGRGYGRNGS
401: ERRGESRNGE AHNGDGKVHQ NGTVEASR
101: VKEGQRMRFS QSFFLVPLNG SYFVLNDVFR YVADEIVEPE ANKKEVEEVI PQVVQPTEQV DEVAEPVTIP TQQPEAKQTT ENTVKKPERA VANGHPKTQE
201: DNVVNDKSNG VDAPKKSFAH IVQDLAQNGA TFNAKASPAK PKSKPVTKPS AARESKAPAP VSEHSSAATI DQQAEGYTIF VANLLMDATP EQLNETFKGF
301: GAITKDGIQV RSYRLKGNCF GFVTFASAEA VKLVLQAHKE SAIRIGNRRV SIEEKRGNND NGRPAMRNGG YRNDNGYRND GYRPRGNGSN GGRGYGRNGS
401: ERRGESRNGE AHNGDGKVHQ NGTVEASR
Arabidopsis Description
At1g13730 [Source:UniProtKB/TrEMBL;Acc:Q9LMX6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.