Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- plasma membrane 1
- mitochondrion 1
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G322100.1 | Wheat | cytosol | 33.33 | 17.61 |
| TraesCS7D01G414000.1 | Wheat | cytosol | 32.14 | 16.98 |
| TraesCS7A01G421800.1 | Wheat | cytosol | 30.95 | 16.25 |
| KRH45051 | Soybean | cytosol | 71.43 | 12.99 |
| KRH01288 | Soybean | cytosol | 67.86 | 11.97 |
| GSMUA_Achr4P00640_001 | Banana | cytosol | 51.19 | 11.11 |
| HORVU0Hr1G007150.3 | Barley | cytosol | 33.33 | 10.04 |
| VIT_14s0068g00310.t01 | Wine grape | cytosol | 61.9 | 9.83 |
| Solyc06g083300.2.1 | Tomato | nucleus | 44.05 | 7.77 |
| Solyc09g059310.2.1 | Tomato | extracellular, nucleus | 42.86 | 7.59 |
| Solyc06g007780.2.1 | Tomato | cytosol | 41.67 | 7.32 |
| Os07t0603100-01 | Rice | extracellular | 46.43 | 6.85 |
| Zm00001d047289_P003 | Maize | plasma membrane | 45.24 | 6.51 |
| Os03t0418800-01 | Rice | mitochondrion | 40.48 | 6.5 |
| EER94684 | Sorghum | cytosol | 45.24 | 6.13 |
| Solyc05g012240.1.1 | Tomato | cytosol | 29.76 | 6.08 |
| HORVU3Hr1G089630.1 | Barley | cytosol | 36.9 | 5.71 |
| TraesCS3D01G392700.1 | Wheat | cytosol, nucleus, plastid | 36.9 | 5.69 |
| TraesCS3B01G431000.2 | Wheat | cytosol | 36.9 | 5.67 |
| TraesCS3A01G398600.1 | Wheat | cytosol | 36.9 | 5.66 |
| Solyc09g090940.2.1 | Tomato | nucleus | 29.76 | 5.34 |
| Zm00001d022071_P002 | Maize | cytosol | 36.9 | 5.29 |
| HORVU2Hr1G032730.1 | Barley | cytosol, nucleus, peroxisome | 38.1 | 5.14 |
| TraesCS2A01G176100.1 | Wheat | cytosol, nucleus, plastid | 38.1 | 5.08 |
| TraesCS2D01G183500.1 | Wheat | cytosol | 38.1 | 5.08 |
| Solyc06g083730.2.1 | Tomato | nucleus | 27.38 | 5.05 |
| TraesCS2B01G202200.1 | Wheat | cytosol | 36.9 | 4.94 |
| OQU90215 | Sorghum | cytosol | 36.9 | 4.01 |
| Solyc02g088920.2.1 | Tomato | cytosol | 17.86 | 3.8 |
| GSMUA_Achr1P24520_001 | Banana | nucleus | 42.86 | 3.64 |
| KXG39124 | Sorghum | cytosol | 4.76 | 2.5 |
| KRH57274 | Soybean | cytosol, mitochondrion | 5.95 | 2.33 |
| Solyc02g030530.1.1 | Tomato | cytosol | 7.14 | 2.11 |
| Solyc02g032790.1.1 | Tomato | cytosol | 7.14 | 1.99 |
| Solyc05g012230.2.1 | Tomato | extracellular | 9.52 | 1.95 |
| Solyc02g066830.2.1 | Tomato | cytosol | 7.14 | 1.5 |
| Solyc02g030490.1.1 | Tomato | cytosol | 1.19 | 0.41 |
Protein Annotations
| EnsemblPlants:Solyc10g083060.1.1 | EnsemblPlantsGene:Solyc10g083060.1 | Gene3D:3.10.450.50 | InterPro:IPR018222 | InterPro:NTF2 | InterPro:NTF2-like_dom_sf |
| InterPro:Nuclear_transport_factor_2_euk | PANTHER:PTHR10693 | PANTHER:PTHR10693:SF27 | PFAM:PF02136 | PFscan:PS50177 | SUPFAM:SSF54427 |
| UniParc:UPI0002769C15 | UniProt:K4D393 | MapMan:16.9.1 | : | : | : |
Description
No Description!
Coordinates
chr10:+:62956506..62956815
Molecular Weight (calculated)
9495.4 Da
IEP (calculated)
9.719
GRAVY (calculated)
-0.325
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MAMQTVAQPS AQVVGNTFVE QYYQIQHHSP ESVYRFYQDS SVLSRPDANG VMTSVTTMKV LGKRNYHLSL TIYLSLTPKP SQKL
001: MNFSVLLYIN SKATFFSSSS IFLFSRRSLF FSRFSCKTLT SAIAKEAFLR SSLRNFPVNR QLRLFQFLDR FFITSICAYL LRESSSHLAF ELDTDTHTAM
101: AMLGAQQVPA AACTPDMVGN AFVPQYYHIL HQSPEHVHRF YQEISKLGRP EENGLMSITS TLQAIDKKIM ALGYGVISAE IATVDTQESH GGGYIVLVTG
201: YLTGKDSVRR TFSQTFFLAP QETGYFVLND MFRFIDEGTV VHGNQIPVNN VQAPVNTYQD TAAAKEIPDD FVQEKYVQEN HAVKQTEVLS KSINEPEKVF
301: TPSEDEQVSA AEEALVTETV NEAPIEVQKV GESDSRTGEI PKRSYASIVK VMKENAAPMS ASRTPTKVEP KKQEDQAIHI PLPTPLSEKS DSGANVAVNE
401: NNQENERALG PSIYLKGLPL DATPALLENE FQKFGLIRTN GIQVRSQKGF CFGFVEFESA SSMQSAIEAS PVMLNGHKVV VEEKRSTARG NYRGRSTFGV
501: NTGYRNEGGR GRGSFGGGRG GYGRTDFNGY GNNRGNNRGG YANRANGDGG GFPRANGNNG RVRRGGGNDA NRATKPVDDA PRVSVAA
101: AMLGAQQVPA AACTPDMVGN AFVPQYYHIL HQSPEHVHRF YQEISKLGRP EENGLMSITS TLQAIDKKIM ALGYGVISAE IATVDTQESH GGGYIVLVTG
201: YLTGKDSVRR TFSQTFFLAP QETGYFVLND MFRFIDEGTV VHGNQIPVNN VQAPVNTYQD TAAAKEIPDD FVQEKYVQEN HAVKQTEVLS KSINEPEKVF
301: TPSEDEQVSA AEEALVTETV NEAPIEVQKV GESDSRTGEI PKRSYASIVK VMKENAAPMS ASRTPTKVEP KKQEDQAIHI PLPTPLSEKS DSGANVAVNE
401: NNQENERALG PSIYLKGLPL DATPALLENE FQKFGLIRTN GIQVRSQKGF CFGFVEFESA SSMQSAIEAS PVMLNGHKVV VEEKRSTARG NYRGRSTFGV
501: NTGYRNEGGR GRGSFGGGRG GYGRTDFNGY GNNRGNNRGG YANRANGDGG GFPRANGNNG RVRRGGGNDA NRATKPVDDA PRVSVAA
Arabidopsis Description
Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J8X6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.