Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G007150.3 | Barley | cytosol | 41.25 | 23.66 |
| Zm00001d047289_P003 | Maize | plasma membrane | 80.0 | 21.92 |
| EER94684 | Sorghum | cytosol | 83.75 | 21.61 |
| Os03t0418800-01 | Rice | mitochondrion | 52.5 | 16.06 |
| GSMUA_Achr4P00640_001 | Banana | cytosol | 36.25 | 14.99 |
| Solyc02g032790.1.1 | Tomato | cytosol | 26.88 | 14.24 |
| KRH57274 | Soybean | cytosol, mitochondrion | 18.12 | 13.49 |
| Solyc02g030530.1.1 | Tomato | cytosol | 23.75 | 13.33 |
| HORVU3Hr1G089630.1 | Barley | cytosol | 42.5 | 12.52 |
| TraesCS3D01G392700.1 | Wheat | cytosol, nucleus, plastid | 42.5 | 12.48 |
| TraesCS3B01G431000.2 | Wheat | cytosol | 42.5 | 12.43 |
| TraesCS3A01G398600.1 | Wheat | cytosol | 42.5 | 12.41 |
| Solyc02g030490.1.1 | Tomato | cytosol | 18.12 | 11.79 |
| Solyc02g088920.2.1 | Tomato | cytosol | 28.12 | 11.39 |
| VIT_01s0011g00400.t01 | Wine grape | cytosol | 34.38 | 11.36 |
| CDY42844 | Canola | cytosol | 31.25 | 11.24 |
| Bra029343.1-P | Field mustard | cytosol | 31.25 | 11.14 |
| Bra012989.1-P | Field mustard | cytosol | 31.25 | 11.11 |
| KRH03143 | Soybean | cytosol, nucleus | 31.88 | 11.09 |
| VIT_17s0000g05240.t01 | Wine grape | golgi, mitochondrion | 34.38 | 11.0 |
| CDY47006 | Canola | cytosol | 29.38 | 10.85 |
| KRH56802 | Soybean | cytosol, nucleus | 31.25 | 10.82 |
| OQU81322 | Sorghum | cytosol, plastid | 30.62 | 10.7 |
| AT5G60980.3 | Thale cress | cytosol | 30.62 | 10.65 |
| KRH45051 | Soybean | cytosol | 30.62 | 10.61 |
| EES06843 | Sorghum | cytosol | 31.88 | 10.6 |
| CDY16827 | Canola | cytosol | 30.0 | 10.57 |
| Bra035946.1-P | Field mustard | cytosol | 30.0 | 10.57 |
| KRH01288 | Soybean | cytosol | 30.62 | 10.29 |
| Solyc02g066830.2.1 | Tomato | cytosol | 25.0 | 10.03 |
| CDY23092 | Canola | mitochondrion | 28.75 | 9.77 |
| CDY02179 | Canola | plastid | 30.62 | 9.72 |
| VIT_14s0068g00310.t01 | Wine grape | cytosol | 30.0 | 9.07 |
| PGSC0003DMT400003713 | Potato | cytosol | 27.5 | 8.91 |
| CDX87195 | Canola | plastid | 28.75 | 8.85 |
| KXG36602 | Sorghum | cytosol | 21.25 | 7.74 |
| EES11106 | Sorghum | cytosol | 20.62 | 7.45 |
| OQU90215 | Sorghum | cytosol | 33.12 | 6.85 |
| GSMUA_Achr1P24520_001 | Banana | nucleus | 32.5 | 5.26 |
| Solyc10g083060.1.1 | Tomato | cytosol | 2.5 | 4.76 |
Protein Annotations
| EnsemblPlants:KXG39124 | EnsemblPlantsGene:SORBI_3001G335600 | Gene3D:3.10.450.50 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0008150 | InterPro:IPR018222 | InterPro:NTF2 | InterPro:NTF2-like_dom_sf | InterPro:Nuclear_transport_factor_2_euk |
| PANTHER:PTHR10693 | PANTHER:PTHR10693:SF41 | PFAM:PF02136 | PFscan:PS50177 | ProteinID:KXG39124 | ProteinID:KXG39124.1 |
| SUPFAM:SSF54427 | UniParc:UPI00081AB3B4 | UniProt:A0A1B6QMI6 | MapMan:16.9.1 | : | : |
Description
hypothetical protein
Coordinates
chr1:-:62418689..62419483
Molecular Weight (calculated)
17336.3 Da
IEP (calculated)
4.429
GRAVY (calculated)
-0.145
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYVTTKSGI KEKIMSMDFR NCLTEVESVD AQLSHKDGVL IVVIGSLTSD EGVFRRFTQS FFLAPQKSGG YFVLTDIFRF ILESKPAAEI NQVASQENAI
101: SQNGRPASET SSALPEPIPA DRSVISDHAT AESNVTERQV SDPTANGSAI ENAVDTCVNF
101: SQNGRPASET SSALPEPIPA DRSVISDHAT AESNVTERQV SDPTANGSAI ENAVDTCVNF
001: MAQQEASPSP GAEVVGRAFV EQYYHILHQS PGLVHRFYQD SSFLTRPDVT GAVTTVTTMQ AINDKILSLK YEDYTAEIET ADAQESHERG VIVLVTGRLT
101: GNDNVRKKFS QSFFLAPQDK GYFVLNDVFR FLEEKEVTAQ ARSVPINGTT RDVQAPIEPE RVVVSHEPEV EPEPVASIEE EDLDNVAEVY DPSDKDEGVV
201: VDVEPIEPPT QISHNEILSV PQGDAPKHSY ASILKQMKSS PAPTTHVARN KPRPAPVNQK LTAPPAEPAA RPEASAHENV PNSSHVDVED DGHSIYVRNL
301: PFDSTPTQLE EVFKNFGAIK HEGIQVRSNK QQGFCFGFVE FETSSGKQSA LEASPVTIGD RQAVVEEKKT NSRGGGNNGG SRGRYFSGRG SFRNESFKGG
401: RGGGGRGGYG RGGGEFSGRP KSSNPRNGGE GYQRVPQNGG GGRGGRGEGG RGGARGGGSS
101: GNDNVRKKFS QSFFLAPQDK GYFVLNDVFR FLEEKEVTAQ ARSVPINGTT RDVQAPIEPE RVVVSHEPEV EPEPVASIEE EDLDNVAEVY DPSDKDEGVV
201: VDVEPIEPPT QISHNEILSV PQGDAPKHSY ASILKQMKSS PAPTTHVARN KPRPAPVNQK LTAPPAEPAA RPEASAHENV PNSSHVDVED DGHSIYVRNL
301: PFDSTPTQLE EVFKNFGAIK HEGIQVRSNK QQGFCFGFVE FETSSGKQSA LEASPVTIGD RQAVVEEKKT NSRGGGNNGG SRGRYFSGRG SFRNESFKGG
401: RGGGGRGGYG RGGGEFSGRP KSSNPRNGGE GYQRVPQNGG GGRGGRGEGG RGGARGGGSS
Arabidopsis Description
AT5g60980/MSL3_100 [Source:UniProtKB/TrEMBL;Acc:Q9FME2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.