Factsheet for TraesCS7D01G414000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G322100.1	Wheat	cytosol	94.34	94.34
TraesCS7A01G421800.1	Wheat	cytosol	88.05	87.5
Solyc10g083060.1.1	Tomato	cytosol	16.98	32.14
GSMUA_Achr4P00640_001	Banana	cytosol	47.17	19.38
TraesCS2D01G183500.1	Wheat	cytosol	66.67	16.83
Os07t0603100-01	Rice	extracellular	52.83	14.76
KRH45051	Soybean	cytosol	42.77	14.72
KRH03143	Soybean	cytosol, nucleus	41.51	14.35
CDY47006	Canola	cytosol	38.99	14.32
Bra035946.1-P	Field mustard	cytosol	40.88	14.32
CDY16827	Canola	cytosol	40.88	14.32
KRH56802	Soybean	cytosol, nucleus	41.51	14.29
KRH01288	Soybean	cytosol	42.77	14.29
VIT_01s0011g00400.t01	Wine grape	cytosol	43.4	14.26
Bra012989.1-P	Field mustard	cytosol	40.25	14.22
PGSC0003DMT400003713	Potato	cytosol	44.03	14.17
CDY42844	Canola	cytosol	39.62	14.16
Bra029343.1-P	Field mustard	cytosol	39.62	14.03
AT5G60980.3	Thale cress	cytosol	40.25	13.91
TraesCS2D01G277000.1	Wheat	plastid	41.51	13.58
CDY23092	Canola	mitochondrion	39.62	13.38
VIT_17s0000g05240.t01	Wine grape	golgi, mitochondrion	41.51	13.2
VIT_14s0068g00310.t01	Wine grape	cytosol	42.77	12.85
CDY02179	Canola	plastid	40.25	12.7
CDX87195	Canola	plastid	39.62	12.12
TraesCS3D01G392700.1	Wheat	cytosol, nucleus, plastid	41.51	12.11
Solyc02g030530.1.1	Tomato	cytosol	21.38	11.93
Solyc02g032790.1.1	Tomato	cytosol	22.64	11.92
Zm00001d022071_P002	Maize	cytosol	43.4	11.77
KRH57274	Soybean	cytosol, mitochondrion	15.72	11.63
Solyc02g088920.2.1	Tomato	cytosol	27.67	11.14
Solyc02g030490.1.1	Tomato	cytosol	16.98	10.98
TraesCS7D01G280400.2	Wheat	cytosol	27.04	9.77
Solyc02g066830.2.1	Tomato	cytosol	23.9	9.52
OQU90215	Sorghum	cytosol	43.4	8.91
GSMUA_Achr1P24520_001	Banana	nucleus	47.8	7.69
TraesCS2D01G363800.1	Wheat	nucleus	20.75	7.35

Protein Annotations

EnsemblPlants:TraesCS7D01G414000.1	EnsemblPlantsGene:TraesCS7D01G414000	Gene3D:3.10.450.50	InterPro:IPR018222	InterPro:NTF2	InterPro:NTF2-like_dom_sf
InterPro:Nuclear_transport_factor_2_euk	PANTHER:PTHR10693	PANTHER:PTHR10693:SF26	PFAM:PF02136	PFscan:PS50177	SUPFAM:SSF54427
TIGR:cd00780	MapMan:16.9.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:532368874..532369892

Molecular Weight (calculated)

17722.2 Da

IEP (calculated)

7.232

GRAVY (calculated)

-0.165

Length

159 amino acids

Sequence
(BLAST)

001: MAAKAGNSVG GVLPHPHVIG NAFAQHYYKI LNESPEDVHK FYHDESILGR KPNSDGTLTS ITTMRDINKH FVSTYLKGCS MQIDNVDSQP SHEGGVLVLV
101: SGSFTVPDAM KRRFTQSFFL APQKGGYFVL NDVLRYIPVE PETPPVKVQV LPLIDYFWV

Best Arabidopsis Sequence Match ( AT1G13730.1 )
(BLAST)

001: MALESNAPVV DPNTIGNSFV EKYYNLLYKS PSQVHQFYLD DSVLGRPGSD GEMVSVKSLK AINEQIMSFD YEISKIQILT ADSQASYMNG VVTLVTGLLT
101: VKEGQRMRFS QSFFLVPLNG SYFVLNDVFR YVADEIVEPE ANKKEVEEVI PQVVQPTEQV DEVAEPVTIP TQQPEAKQTT ENTVKKPERA VANGHPKTQE
201: DNVVNDKSNG VDAPKKSFAH IVQDLAQNGA TFNAKASPAK PKSKPVTKPS AARESKAPAP VSEHSSAATI DQQAEGYTIF VANLLMDATP EQLNETFKGF
301: GAITKDGIQV RSYRLKGNCF GFVTFASAEA VKLVLQAHKE SAIRIGNRRV SIEEKRGNND NGRPAMRNGG YRNDNGYRND GYRPRGNGSN GGRGYGRNGS
401: ERRGESRNGE AHNGDGKVHQ NGTVEASR

Arabidopsis Description

At1g13730 [Source:UniProtKB/TrEMBL;Acc:Q9LMX6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.