Factsheet for TraesCS7D01G280400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G281900.1	Wheat	nucleus	87.95	88.97
TraesCS7B01G179500.1	Wheat	nucleus	87.05	88.05
Os02t0131700-00	Rice	plastid	75.91	74.55
KXG36602	Sorghum	cytosol	72.73	72.89
Zm00001d021999_P002	Maize	plasma membrane	71.59	71.92
HORVU7Hr1G061850.1	Barley	cytosol, mitochondrion, nucleus	87.05	70.53
GSMUA_Achr2P10150_001	Banana	cytosol	42.5	41.56
GSMUA_Achr4P30210_001	Banana	cytosol	41.82	40.98
GSMUA_Achr11P...	Banana	cytosol	41.82	38.98
VIT_05s0049g01940.t01	Wine grape	cytosol	41.36	38.32
KRH33563	Soybean	cytosol	40.0	37.37
KRG92252	Soybean	cytosol	39.32	36.81
KRG90305	Soybean	cytosol	39.55	36.71
PGSC0003DMT400003781	Potato	cytosol	37.73	35.39
Solyc09g090940.2.1	Tomato	nucleus	37.27	35.04
TraesCS2D01G363800.1	Wheat	nucleus	33.64	32.96
TraesCS7D01G414000.1	Wheat	cytosol	9.77	27.04
TraesCS2D01G277000.1	Wheat	plastid	27.73	25.1
TraesCS3D01G392700.1	Wheat	cytosol, nucleus, plastid	21.14	17.06
TraesCS2D01G183500.1	Wheat	cytosol	19.55	13.65
Os02t0131800-01	Rice	cytosol, peroxisome, plasma membrane	3.64	2.94

Protein Annotations

MapMan:16.9.1	Gene3D:3.10.450.50	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR000504	InterPro:IPR012677	InterPro:IPR018222	InterPro:NTF2	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk
InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFAM:PF02136	PFscan:PS50102	PFscan:PS50177	PANTHER:PTHR10693
PANTHER:PTHR10693:SF29	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54427	SUPFAM:SSF54928
EnsemblPlantsGene:TraesCS7D01G280400	EnsemblPlants:TraesCS7D01G280400.2	TIGR:cd00590	TIGR:cd00780	SEG:seg	:

Description

No Description!

Coordinates

chr7D:+:273831684..273834542

Molecular Weight (calculated)

48528.4 Da

IEP (calculated)

4.336

GRAVY (calculated)

-0.425

Length

440 amino acids

Sequence
(BLAST)

001: MASAAAAATQ VGTYFLRNYY NLLQQNPDVV HQFYSEASTM VRVDDLNGTN TTANSMMDIH SLIMSLNFTQ IEIKTANFAN SWGDGVLVMV SGLVQTKEYS
101: NQRKFIQMFF LAPQEKGYFV LNDYFHFVDQ EQVQPAQVRA QEAFETNMAS NTVQTSAEYI HEESQTMQAV PVTSEENDAV DCYTYSEPPQ QVVSQSDNWG
201: DESLQEEPLS SFSNGMAMAA EEPAQPPPVQ PHVEEPVGEP VKKTYASILR TAKAPPLFPI AQSVPVNKPH PTTEANQATL VTSSVAADKP KSDFYAEGHD
301: EEESKSVYVG NVPQNVTEAD LENEFKKFGQ LIPDGVAIRS RKETGGYYAF VEFEELSGVH NALRASPLEI NGRQIYVEER KPNSGIRGGR GEAEVALAAV
401: AEDMREVTST AVAVESRMVI SVSLTTRGAF WGQGTDAPWR

Best Arabidopsis Sequence Match ( AT5G43960.1 )
(BLAST)

001: MATPYPGATQ VGSYFVGQYY QVLQQQPDLI HQFYSEPSRA IRIDGDSTET ANSLLHIHNM VMSLNFTAIE VKTINSVESW EGGVLVVVSG SVKTKEFSNR
101: RSFVQTFFLA PQEKGYFVLS DVFLFVDEGT VYYHQPSYLS EIKHEAQLNP PTRHPDPQVS DYVLEEEASD YVNAVQIKDD LVDKYSLQED QHQPQHEDYE
201: DEVAIEETPR EEVAVDVVHE HRAAPVEEPV GEKSKMSYAS ILKVAKEAAT VPVAATQPSY NKSSQDINEW DQPMRTPSPQ LAAPLAPIQQ SNSSTYVSDY
301: GAEAEDGSGF EDFEFKSVYV RNLPSDISAS EIEEEFKNFG TIKPDGVFLR TRKDVMGVCY AFVEFEDMTS VENAIKASPI YLGGRQVYIE ERRPNPAGVR
401: GARRGGGRGR GGYPTEAPRG RFGGRGSGRG NQDGGDYRPR GNGYYRGGGR

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FND0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.