Factsheet for GSMUA_Achr4P30210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P10150_001	Banana	cytosol	84.86	84.67
GSMUA_Achr11P...	Banana	cytosol	64.81	61.65
VIT_05s0049g01940.t01	Wine grape	cytosol	53.9	50.95
KRH33563	Soybean	cytosol	51.89	49.47
KRG90305	Soybean	cytosol	51.45	48.73
KRG92252	Soybean	cytosol	50.11	47.87
Os02t0131700-00	Rice	plastid	47.44	47.54
TraesCS7A01G281900.1	Wheat	nucleus	44.99	46.44
Zm00001d021999_P002	Maize	plasma membrane	45.21	46.35
TraesCS7B01G179500.1	Wheat	nucleus	44.77	46.21
Solyc09g090940.2.1	Tomato	nucleus	48.11	46.15
PGSC0003DMT400003781	Potato	cytosol	47.88	45.84
KXG36602	Sorghum	cytosol	44.77	45.79
TraesCS7D01G280400.2	Wheat	cytosol	40.98	41.82
HORVU7Hr1G061850.1	Barley	cytosol, mitochondrion, nucleus	44.77	37.02
GSMUA_Achr8P16490_001	Banana	cytosol	30.07	30.41
GSMUA_Achr3P02500_001	Banana	cytosol, plastid	25.61	30.03
GSMUA_Achr10P...	Banana	cytosol	24.94	29.71
GSMUA_Achr4P00640_001	Banana	cytosol	24.5	28.42
GSMUA_Achr8P17520_001	Banana	cytosol	10.24	28.22
GSMUA_Achr8P00910_001	Banana	cytosol, plastid	24.05	26.93
GSMUA_Achr6P12010_001	Banana	cytosol	21.83	26.92
GSMUA_Achr8P17500_001	Banana	cytosol	20.27	26.45
GSMUA_Achr9P01610_001	Banana	cytosol	22.27	25.64
GSMUA_Achr11P...	Banana	cytosol	15.37	24.04
GSMUA_Achr8P17510_001	Banana	cytosol	8.24	24.03
GSMUA_Achr1P24520_001	Banana	nucleus	29.18	13.26
Os02t0131800-01	Rice	cytosol, peroxisome, plasma membrane	2.0	1.65

Protein Annotations

MapMan:16.9.1	Gene3D:3.10.450.50	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	EnsemblPlantsGene:GSMUA_Achr4G30210_001	EnsemblPlants:GSMUA_Achr4P30210_001	EnsemblPlants:GSMUA_Achr4T30210_001	InterPro:IPR000504	InterPro:IPR012677
InterPro:IPR018222	UniProt:M0STD3	InterPro:NTF2	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFAM:PF02136	PFscan:PS50102	PFscan:PS50177	PANTHER:PTHR10693	PANTHER:PTHR10693:SF31
InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54427	SUPFAM:SSF54928	UniParc:UPI000296C120
SEG:seg	:	:	:	:	:

Description

Putative G3BP-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G30210_001]

Coordinates

chr4:-:27902593..27909223

Molecular Weight (calculated)

49992.3 Da

IEP (calculated)

5.057

GRAVY (calculated)

-0.578

Length

449 amino acids

Sequence
(BLAST)

001: MASLYPGHVG AVQVGAYFLE QYYRILQQQP ELVHQFYTDV SSMARFDGTA TETATGMVQI HHLVMCLNFN GIEIKSAQSL ESWNGGVLVM VSGYVQLKEY
101: SVRRKFVETF FLAPQEKGYF VLNDIFHLLE EEHIHQHPTV ILAHSNLDTN LNAPSSVPET VSDYILEEQV QSRDLVPSLE ENDAVEKYSI PEALQQLPES
201: DERVDESPVE DAASYPSALD TARDPPLATP EEPVEEPTRQ TYASILRSKG QSGQPMPHTT SLSKPSQVAS EWAPPSLQPT SQRPQPALVS ERSISEAAEE
301: APLVEDEGEA RSVYVGNLSS SISVLDLEQV FKNFGRLRPD GVSIRSRKES DVFYAFIEYE DAIGVHNALK ASPIQLNGRL IHVEGRRPNS GASRGKRGRG
401: RGGYPSETSR GRFGGRMFGR GSRQDSNDRD YNSRTRGNGY PQRVQERGF

Best Arabidopsis Sequence Match ( AT5G43960.1 )
(BLAST)

001: MATPYPGATQ VGSYFVGQYY QVLQQQPDLI HQFYSEPSRA IRIDGDSTET ANSLLHIHNM VMSLNFTAIE VKTINSVESW EGGVLVVVSG SVKTKEFSNR
101: RSFVQTFFLA PQEKGYFVLS DVFLFVDEGT VYYHQPSYLS EIKHEAQLNP PTRHPDPQVS DYVLEEEASD YVNAVQIKDD LVDKYSLQED QHQPQHEDYE
201: DEVAIEETPR EEVAVDVVHE HRAAPVEEPV GEKSKMSYAS ILKVAKEAAT VPVAATQPSY NKSSQDINEW DQPMRTPSPQ LAAPLAPIQQ SNSSTYVSDY
301: GAEAEDGSGF EDFEFKSVYV RNLPSDISAS EIEEEFKNFG TIKPDGVFLR TRKDVMGVCY AFVEFEDMTS VENAIKASPI YLGGRQVYIE ERRPNPAGVR
401: GARRGGGRGR GGYPTEAPRG RFGGRGSGRG NQDGGDYRPR GNGYYRGGGR

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FND0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.