Factsheet for GSMUA_Achr10P17140_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P12010_001	Banana	cytosol	74.01	76.65
GSMUA_Achr3P02500_001	Banana	cytosol, plastid	74.27	73.11
GSMUA_Achr8P16490_001	Banana	cytosol	74.54	63.29
GSMUA_Achr8P00910_001	Banana	cytosol, plastid	57.82	54.36
GSMUA_Achr11P...	Banana	cytosol	38.46	50.52
Os02t0497700-01	Rice	cytosol, nucleus, plasma membrane	54.64	42.92
Os04t0372800-01	Rice	nucleus, plasma membrane	54.91	42.59
GSMUA_Achr9P01610_001	Banana	cytosol	43.77	42.31
EES06843	Sorghum	cytosol	53.32	41.79
Zm00001d050610_P001	Maize	plasma membrane	52.52	41.51
GSMUA_Achr4P00640_001	Banana	cytosol	42.44	41.34
Zm00001d016528_P001	Maize	cytosol, mitochondrion, plasma membrane	52.25	41.04
TraesCS2B01G295400.1	Wheat	plastid	52.52	40.66
TraesCS2D01G277000.1	Wheat	plastid	52.25	40.53
HORVU2Hr1G042280.3	Barley	plastid	35.01	39.88
GSMUA_Achr8P17520_001	Banana	cytosol	17.24	39.88
TraesCS2A01G278000.1	Wheat	nucleus	51.72	39.71
Zm00001d004070_P003	Maize	extracellular, plasma membrane	50.93	39.34
GSMUA_Achr8P17510_001	Banana	cytosol	15.65	38.31
OQU81322	Sorghum	cytosol, plastid	44.56	36.68
Zm00001d025165_P001	Maize	plastid	51.19	32.6
GSMUA_Achr8P17500_001	Banana	cytosol	29.71	32.56
GSMUA_Achr11P...	Banana	cytosol	32.36	25.85
GSMUA_Achr2P10150_001	Banana	cytosol	29.97	25.11
GSMUA_Achr4P30210_001	Banana	cytosol	29.71	24.94
GSMUA_Achr1P24520_001	Banana	nucleus	41.64	15.89

Protein Annotations

MapMan:16.9.1	Gene3D:3.10.450.50	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	EnsemblPlantsGene:GSMUA_Achr10G17140_001	EnsemblPlants:GSMUA_Achr10P17140_001	EnsemblPlants:GSMUA_Achr10T17140_001	InterPro:IPR000504	InterPro:IPR012677
InterPro:IPR018222	UniProt:M0RIY9	InterPro:NTF2	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFAM:PF02136	PFscan:PS50102	PFscan:PS50177	PANTHER:PTHR10693	PANTHER:PTHR10693:SF30
InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54427	SUPFAM:SSF54928	UniParc:UPI0002965ECE
SEG:seg	:	:	:	:	:

Description

Putative Ras GTPase-activating protein-binding protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G17140_001]

Coordinates

chr10:-:24466462..24475566

Molecular Weight (calculated)

40770.1 Da

IEP (calculated)

4.331

GRAVY (calculated)

-0.510

Length

377 amino acids

Sequence
(BLAST)

001: MAAQPSSVDR SPLSAQVVGN AFVQQYYHIL QQSPELVYRF YQEGSKLGRP DAHGAMSSVT TTDAINAKIL SMGFVRAETK TVDAQESLGG GVTVLVTGHV
101: TGEDNVKRDF TQSFFLALQD KGYYVLNDIF RFVEEVNHQQ AQQGLANGTV APHAPKQDLP SEQGQHDLDQ TTSSQVEDEE VNEEEVYNPS DNGEVVEEEE
201: STGVVIDEVP NNSESNVATA QEEMPKKSYA SIVKDMNNAS VSPPTRAPPK PSSIKAEPQV LPAPPAGPAS DMPTSCSTTV DSNYTQDAEA DGYSIYVKNL
301: PLDATPAQLE EEFRKFGAIK PDGIQVRSHK LQGFCFGFVE FEVANAAQSA IEASPIMIGG RPAYVEEKRA TGSRGKC

Best Arabidopsis Sequence Match ( AT5G60980.2 )
(BLAST)

001: MAQQEASPSP GAEVVGRAFV EQYYHILHQS PGLVHRFYQD SSFLTRPDVT GAVTTVTTMQ AINDKILSLK YEDYTAEIET ADAQESHERG VIVLVTGRLT
101: GNDNVRKKFS QSFFLAPQDK GYFVLNDVFR FLEEKEVTAQ ARSVPINGTT RDVQAPIEPE RVVVSHEPEV EPEPVASIEE EDLDNVAEVY DPSDKDEGVV
201: VDVEPIEPPT QISHNEILSV PQGDAPKHSY ASILKQMKSS PAPTTHVARN KPRPAPVNQK LTAPPAEPAA RPEASAHENV PNSSHVDVED DGHSIYVRNL
301: PFDSTPTQLE EVFKNFGAIK HEGIQVRSNK QQGFCFGFVE FETSSGKQSA LEASPVTIGD RQAVVEEKKT NSRGGGNNGG SRGRYFSGRG SFRNESFKGG
401: RGGGGRGGYG RGGGEFSGRP KSSNPRNGGE GYQRVPQNGG GGRGGRGEGG RGGARGGGSS

Arabidopsis Description

AT5g60980/MSL3_100 [Source:UniProtKB/TrEMBL;Acc:Q9FME2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.