Factsheet for GSMUA_Achr2P10150_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30210_001	Banana	cytosol	84.67	84.86
GSMUA_Achr11P...	Banana	cytosol	65.11	62.08
VIT_05s0049g01940.t01	Wine grape	cytosol	56.22	53.26
KRH33563	Soybean	cytosol	52.67	50.32
KRG90305	Soybean	cytosol	52.44	49.79
Os02t0131700-00	Rice	plastid	48.44	48.66
KRG92252	Soybean	cytosol	50.22	48.09
TraesCS7B01G179500.1	Wheat	nucleus	45.33	46.9
TraesCS7A01G281900.1	Wheat	nucleus	45.33	46.9
Zm00001d021999_P002	Maize	plasma membrane	45.56	46.8
Solyc09g090940.2.1	Tomato	nucleus	48.22	46.37
KXG36602	Sorghum	cytosol	44.89	46.01
PGSC0003DMT400003781	Potato	cytosol	47.56	45.63
TraesCS7D01G280400.2	Wheat	cytosol	41.56	42.5
HORVU7Hr1G061850.1	Barley	cytosol, mitochondrion, nucleus	45.56	37.75
GSMUA_Achr3P02500_001	Banana	cytosol, plastid	26.44	31.07
GSMUA_Achr10P...	Banana	cytosol	25.11	29.97
GSMUA_Achr8P16490_001	Banana	cytosol	29.56	29.95
GSMUA_Achr8P17520_001	Banana	cytosol	10.22	28.22
GSMUA_Achr6P12010_001	Banana	cytosol	22.44	27.75
GSMUA_Achr4P00640_001	Banana	cytosol	23.56	27.39
GSMUA_Achr8P00910_001	Banana	cytosol, plastid	24.22	27.18
GSMUA_Achr9P01610_001	Banana	cytosol	22.44	25.9
GSMUA_Achr8P17500_001	Banana	cytosol	19.33	25.29
GSMUA_Achr11P...	Banana	cytosol	16.0	25.09
GSMUA_Achr8P17510_001	Banana	cytosol	8.22	24.03
GSMUA_Achr1P24520_001	Banana	nucleus	28.89	13.16
Os02t0131800-01	Rice	cytosol, peroxisome, plasma membrane	2.0	1.65

Protein Annotations

MapMan:16.9.1	Gene3D:3.10.450.50	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	EnsemblPlantsGene:GSMUA_Achr2G10150_001	EnsemblPlants:GSMUA_Achr2P10150_001	EnsemblPlants:GSMUA_Achr2T10150_001	InterPro:IPR000504	InterPro:IPR012677
InterPro:IPR018222	UniProt:M0S6Q6	InterPro:NTF2	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFAM:PF02136	PFscan:PS50102	PFscan:PS50177	PANTHER:PTHR10693	PANTHER:PTHR10693:SF31
InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54427	SUPFAM:SSF54928	UniParc:UPI0002965846
SEG:seg	:	:	:	:	:

Description

Putative G3BP-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G10150_001]

Coordinates

chr2:+:13369711..13377720

Molecular Weight (calculated)

50005.1 Da

IEP (calculated)

5.598

GRAVY (calculated)

-0.633

Length

450 amino acids

Sequence
(BLAST)

001: MASLYPGHVG AVQVGAYFLE QYYRILQQQP ELVHQFYTDV SSMARFDGTA TETATGMVQI HRLVMCLNFK GIEIKSAHSL ESWNGGVLVM VSGYVQLKDY
101: SVRRKFVQTF FLAPQEKGFF VLNDIFHLLE EEHVHQHPAA IVGHSNFETN LNVSSSVPET VSDYMLGEQV QDQDLVPPVH VEENDIVEKY SIPEAPQQLP
201: QPDERIDESP AEDTASYPSG LDTMREPPPA TPEEPVGEPT RQTYASILRA KSQSGQSIPH PTSLTKTTHV ASEWAHSSQS TAQQPQPAMV PEKSSSEVVE
301: EAPPVEDEGE ARSVYVGNLP SSISASDLEQ VFKNFGRLRS DGVSIRSRKE SDVFYAFIEY EDAIGVQNAL KASPIQLNGR LIHVEGRRPN SGASRGKRGR
401: GRGGYPSDAS RGRFTSRNFG RGSRQDSYDR DYNSRPRGNG YPQRVQERGS

Best Arabidopsis Sequence Match ( AT5G43960.1 )
(BLAST)

001: MATPYPGATQ VGSYFVGQYY QVLQQQPDLI HQFYSEPSRA IRIDGDSTET ANSLLHIHNM VMSLNFTAIE VKTINSVESW EGGVLVVVSG SVKTKEFSNR
101: RSFVQTFFLA PQEKGYFVLS DVFLFVDEGT VYYHQPSYLS EIKHEAQLNP PTRHPDPQVS DYVLEEEASD YVNAVQIKDD LVDKYSLQED QHQPQHEDYE
201: DEVAIEETPR EEVAVDVVHE HRAAPVEEPV GEKSKMSYAS ILKVAKEAAT VPVAATQPSY NKSSQDINEW DQPMRTPSPQ LAAPLAPIQQ SNSSTYVSDY
301: GAEAEDGSGF EDFEFKSVYV RNLPSDISAS EIEEEFKNFG TIKPDGVFLR TRKDVMGVCY AFVEFEDMTS VENAIKASPI YLGGRQVYIE ERRPNPAGVR
401: GARRGGGRGR GGYPTEAPRG RFGGRGSGRG NQDGGDYRPR GNGYYRGGGR

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FND0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.