Factsheet for HORVU7Hr1G061850.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G281900.1	Wheat	nucleus	76.8	95.86
TraesCS7B01G179500.1	Wheat	nucleus	76.24	95.17
TraesCS7D01G280400.2	Wheat	cytosol	70.53	87.05
Os02t0131700-00	Rice	plastid	66.67	80.8
KXG36602	Sorghum	cytosol	64.27	79.5
Zm00001d021999_P002	Maize	plasma membrane	62.98	78.08
GSMUA_Achr2P10150_001	Banana	cytosol	37.75	45.56
GSMUA_Achr4P30210_001	Banana	cytosol	37.02	44.77
GSMUA_Achr11P...	Banana	cytosol	37.75	43.43
VIT_05s0049g01940.t01	Wine grape	cytosol	36.28	41.47
KRH33563	Soybean	cytosol	35.73	41.19
KRG90305	Soybean	cytosol	35.36	40.51
KRG92252	Soybean	cytosol	34.81	40.21
PGSC0003DMT400003781	Potato	cytosol	33.33	38.59
Solyc09g090940.2.1	Tomato	nucleus	32.97	38.25
HORVU2Hr1G088550.9	Barley	cytosol, nucleus	26.89	30.29
HORVU2Hr1G042280.3	Barley	plastid	14.18	23.26
HORVU3Hr1G089630.1	Barley	cytosol	18.78	18.78
HORVU0Hr1G007150.3	Barley	cytosol	9.02	17.56
HORVU2Hr1G032730.1	Barley	cytosol, nucleus, peroxisome	17.68	15.41
Os02t0131800-01	Rice	cytosol, peroxisome, plasma membrane	6.63	6.61

Protein Annotations

MapMan:16.9.1	Gene3D:3.10.450.50	Gene3D:3.30.70.330	UniProt:A0A287WP26	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	EnsemblPlantsGene:HORVU7Hr1G061850	EnsemblPlants:HORVU7Hr1G061850.1	InterPro:IPR000504	InterPro:IPR012677
InterPro:IPR018222	InterPro:NTF2	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076
PFAM:PF02136	PFscan:PS50102	PFscan:PS50177	PANTHER:PTHR10693	PANTHER:PTHR10693:SF29	InterPro:RBD_domain_sf
InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54427	SUPFAM:SSF54928	UniParc:UPI000B466C1E	SEG:seg

Description

No Description!

Coordinates

chrchr7H:-:292453094..292457605

Molecular Weight (calculated)

59276.0 Da

IEP (calculated)

5.740

GRAVY (calculated)

-0.536

Length

543 amino acids

Sequence
(BLAST)

001: GKGNRYLSLS LPSCPSLRAV IRDESSRVHP RDANPSPLLS SPLPPLHPAK GAHANTHEQS GRTHPLTAAA AAAAAAAAAA SDFETLSLLD LARGISRSRV
101: TPYSTALPMA SAAAATQVGT YFLRNYYNLL QQNPDVVHQF YSEASTMVRV DDLNGTNTTA NSMMDIHSLI MSLNFTQIEI KTANFANSWG DGVLVMVSGL
201: VQTKEYSNQR KFIQMFFLAP QEKGYFVLND YFHFVDQEQV QPAQVRAQEA FETNLASNTV QTSAEYIHEE SQTMQAVPVT SEENDAVDSY TYSEPPQQVV
301: SQSDNWGDES LQEEPLSSYS NGMAMALEEP AQPPPVQPHI EEPVGEPVKK TYASILRTAK APPLFHVAQS VPVNKPLSTT EANLATQVTS SMAADKPKSD
401: FYAEGHDEEE SKSVYVGNVP QNVTEADLEN EFKKFGQLIP DGVAIRSRKE TGGYYAFVEF EELSGVHNAL RASPLEINGR QIYVEERKPN SGIRGGRRGG
501: GRGRFGGGGR GYARGDEYNG SRGKSNGYQR VPHHERGILG ARN

Best Arabidopsis Sequence Match ( AT5G43960.1 )
(BLAST)

001: MATPYPGATQ VGSYFVGQYY QVLQQQPDLI HQFYSEPSRA IRIDGDSTET ANSLLHIHNM VMSLNFTAIE VKTINSVESW EGGVLVVVSG SVKTKEFSNR
101: RSFVQTFFLA PQEKGYFVLS DVFLFVDEGT VYYHQPSYLS EIKHEAQLNP PTRHPDPQVS DYVLEEEASD YVNAVQIKDD LVDKYSLQED QHQPQHEDYE
201: DEVAIEETPR EEVAVDVVHE HRAAPVEEPV GEKSKMSYAS ILKVAKEAAT VPVAATQPSY NKSSQDINEW DQPMRTPSPQ LAAPLAPIQQ SNSSTYVSDY
301: GAEAEDGSGF EDFEFKSVYV RNLPSDISAS EIEEEFKNFG TIKPDGVFLR TRKDVMGVCY AFVEFEDMTS VENAIKASPI YLGGRQVYIE ERRPNPAGVR
401: GARRGGGRGR GGYPTEAPRG RFGGRGSGRG NQDGGDYRPR GNGYYRGGGR

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FND0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.