Factsheet for TraesCS7A01G281900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G179500.1	Wheat	nucleus	97.24	97.24
TraesCS7D01G280400.2	Wheat	cytosol	88.97	87.95
Os02t0131700-00	Rice	plastid	84.14	81.7
KXG36602	Sorghum	cytosol	80.92	80.18
Zm00001d021999_P002	Maize	plasma membrane	79.08	78.54
HORVU7Hr1G061850.1	Barley	cytosol, mitochondrion, nucleus	95.86	76.8
GSMUA_Achr2P10150_001	Banana	cytosol	46.9	45.33
GSMUA_Achr4P30210_001	Banana	cytosol	46.44	44.99
GSMUA_Achr11P...	Banana	cytosol	47.13	43.43
VIT_05s0049g01940.t01	Wine grape	cytosol	44.6	40.84
KRH33563	Soybean	cytosol	44.14	40.76
KRG90305	Soybean	cytosol	43.68	40.08
KRG92252	Soybean	cytosol	42.76	39.57
PGSC0003DMT400003781	Potato	cytosol	41.61	38.59
Solyc09g090940.2.1	Tomato	nucleus	41.15	38.25
TraesCS2A01G366900.1	Wheat	nucleus	36.09	34.97
TraesCS2A01G278000.1	Wheat	nucleus	31.72	28.11
TraesCS7A01G421800.1	Wheat	cytosol	9.89	26.88
TraesCS3A01G398600.1	Wheat	cytosol	23.45	18.61
TraesCS2A01G176100.1	Wheat	cytosol, nucleus, plastid	22.76	15.71
Os02t0131800-01	Rice	cytosol, peroxisome, plasma membrane	3.68	2.94

Protein Annotations

MapMan:16.9.1	Gene3D:3.10.450.50	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR000504	InterPro:IPR012677	InterPro:IPR018222	InterPro:NTF2	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk
InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFAM:PF02136	PFscan:PS50102	PFscan:PS50177	PANTHER:PTHR10693
PANTHER:PTHR10693:SF29	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54427	SUPFAM:SSF54928
EnsemblPlantsGene:TraesCS7A01G281900	EnsemblPlants:TraesCS7A01G281900.1	TIGR:cd00590	TIGR:cd00780	SEG:seg	:

Description

No Description!

Coordinates

chr7A:+:307236139..307238978

Molecular Weight (calculated)

48059.7 Da

IEP (calculated)

4.867

GRAVY (calculated)

-0.624

Length

435 amino acids

Sequence
(BLAST)

001: MASAAAATQV GTYFLRNYYN LLQQNPDVVH QFYSEASTMV RVDDLNGTST TANSMMDIHS LIMSLNFTQI EIKTANFANS WGDGVLVMVS GLVQTKEYSN
101: QRKFIQMFFL APQEKGYFVL NDYFHFVDQE QVQPAQVRAQ EAFETNMASN TVQTSAEYIH EESQTMQAVP VTSEENDAVD SYTYSEPPQQ VVSQSDNWGD
201: ESLQEEPLSS FSNGMAMAPE EPAHPPPVQP HVEEPVGEPV KKTYASILRT AKAPPPFPIA QSVPVSKPHP TTEANQATLV TSSVAADKPK SDFYTEGHDE
301: EESKSVYVGN VPQNVTEADL ENEFKKFGQL IPDGVAIRSR KETGGYYAFV EFEELSGVHN ALRASPLEIN GRQIYVEERK PNSGIRGGRR GGGRGRFGGS
401: GRGYARGDEY SGSRGKSNGY QRVPHHERGI LGARN

Best Arabidopsis Sequence Match ( AT5G43960.1 )
(BLAST)

001: MATPYPGATQ VGSYFVGQYY QVLQQQPDLI HQFYSEPSRA IRIDGDSTET ANSLLHIHNM VMSLNFTAIE VKTINSVESW EGGVLVVVSG SVKTKEFSNR
101: RSFVQTFFLA PQEKGYFVLS DVFLFVDEGT VYYHQPSYLS EIKHEAQLNP PTRHPDPQVS DYVLEEEASD YVNAVQIKDD LVDKYSLQED QHQPQHEDYE
201: DEVAIEETPR EEVAVDVVHE HRAAPVEEPV GEKSKMSYAS ILKVAKEAAT VPVAATQPSY NKSSQDINEW DQPMRTPSPQ LAAPLAPIQQ SNSSTYVSDY
301: GAEAEDGSGF EDFEFKSVYV RNLPSDISAS EIEEEFKNFG TIKPDGVFLR TRKDVMGVCY AFVEFEDMTS VENAIKASPI YLGGRQVYIE ERRPNPAGVR
401: GARRGGGRGR GGYPTEAPRG RFGGRGSGRG NQDGGDYRPR GNGYYRGGGR

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FND0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.